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13_1_40cm_4_scaffold_853

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_853_1
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(164..505)
DNA (342bp) protein (114aa)
Transcriptional regulator, XRE family n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EPE3_CHLPB
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACE03821.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" sourc
13_1_40cm_4_scaffold_853_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(527..949)
DNA (423bp) protein (141aa)
Putative uncharacterized protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
13_1_40cm_4_scaffold_853_3
unknown

Not on your lists

1199..2392
DNA (1194bp) protein (398aa)

This feature has no annotations

13_1_40cm_4_scaffold_853_4
unknown

Not on your lists

comp(2989..3354)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_853_5
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

3862..4434
DNA (573bp) protein (191aa)
Regulatory protein TetR n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGQ0_THEM7
TetR family transcriptional regulator Tax=RBG_16_Chloroflexi_56_8_curated
regulatory protein TetR
13_1_40cm_4_scaffold_853_6
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

4494..5396
DNA (903bp) protein (301aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RA6_SYMTH
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Chloroflexi_56_8_curated
branched-chain amino acid ABC transporter permease
13_1_40cm_4_scaffold_853_7
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

5412..6476
DNA (1065bp) protein (355aa)
Inner-membrane translocator n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FBY7_DESAA
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Chloroflexi_56_8_curated
inner-membrane translocator
13_1_40cm_4_scaffold_853_8
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

6476..7264
DNA (789bp) protein (263aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RA8_SYMTH
branched-chain amino acid ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Chloroflexi_56_8_curated
branched-chain amino acid ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_853_9
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

7257..7982
DNA (726bp) protein (242aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) n=3 Tax=Megamonas RepID=D4KHY7_9FIRM
LivF; ABC-type branched-chain amino acid transport systems, ATPase component; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Chloroflexi_56_8_curated
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
13_1_40cm_4_scaffold_853_10
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

8388..9209
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=uncultured prokaryote RepID=H5SIP6_9ZZZZ
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=RBG_16_Chloroflexi_56_8_curated
extracellular ligand-binding receptor
13_1_40cm_4_scaffold_853_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

9333..10298
DNA (966bp) protein (322aa)
Luciferase-like monooxygenase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJK0_NAKMY
coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein Tax=RBG_16_Chloroflexi_68_14_curated
luciferase-like monooxygenase
13_1_40cm_4_scaffold_853_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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10295..10732
DNA (438bp) protein (146aa)
hypothetical protein id=14627394 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_853_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10732..11889
DNA (1158bp) protein (386aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L484_9ACTO
acd; acyl-CoA dehydrogenase domain-containing protein Tax=RBG_16_Actinobacteria_67_10_curated
acd; acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_853_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11889..12995
DNA (1107bp) protein (369aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CEL21482.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CEL21482.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporan
acyl-CoA dehydrogenase n=1 Tax=Streptomyces canus RepID=UPI00036BFEA6
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_853_15
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13020..14648
DNA (1629bp) protein (543aa)
AMP-dependent synthetase and ligase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SG99_THEM7
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADU50516.1}; Flags: Precursor;; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis;
13_1_40cm_4_scaffold_853_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14677..15438
DNA (762bp) protein (254aa)
short chain enoyl-CoA hydratase (EC:4.2.1.55); K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] Tax=RBG_16_Actinobacteria_68_12_curated
Enoyl-CoA hydratase/isomerase n=2 Tax=Geobacillus RepID=C9RU19_GEOSY
enoyl-CoA hydratase
13_1_40cm_4_scaffold_853_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15431..16618
DNA (1188bp) protein (396aa)
Acetyl-CoA acetyltransferase n=18 Tax=Pseudomonas aeruginosa RepID=V5SUW7_PSEAI
putative acyl-CoA thiolase
Acyl-CoA thiolase {ECO:0000313|EMBL:ERV81777.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa
13_1_40cm_4_scaffold_853_18
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16615..17091)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003820560
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB49853.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium ni
13_1_40cm_4_scaffold_853_19
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

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comp(17095..18240)
DNA (1146bp) protein (382aa)
acyl-CoA dehydrogenase domain-containing protein id=17418203 bin=RBG_16_Aminicenantes_66_30 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
acyl-CoA dehydrogenase domain-containing protein Tax=RBG_16_Aminicenantes_66_30_curated
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_853_20
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18352..19125
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HQY0_9BACL
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJY56948.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacill
gluconate 5-dehydrogenase
13_1_40cm_4_scaffold_853_21
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19152..20375
DNA (1224bp) protein (408aa)
beta-lactamase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036D8B29
Beta-lactamase class C {ECO:0000313|EMBL:CDI03159.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competiba
beta-lactamase class C
13_1_40cm_4_scaffold_853_22
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

20372..21367
DNA (996bp) protein (332aa)
phosphotransferase n=1 Tax=Thermus igniterrae RepID=UPI00037D0712
putative aminoglycoside phosphotransferase
Putative aminoglycoside phosphotransferase {ECO:0000313|EMBL:AHY47887.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter
13_1_40cm_4_scaffold_853_23
Thermus sp. CCB_US3_UF1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

21367..21753
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Thermus sp. CCB_US3_UF1 RepID=G8NDT8_9DEIN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV15137.1}; TaxID=1111069 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. CCB_US3_UF1.;"
13_1_40cm_4_scaffold_853_24
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21761..22627)
DNA (867bp) protein (289aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLW4_DESK7
13_1_40cm_4_scaffold_853_25
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22624..23007)
DNA (384bp) protein (128aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3U1_9FIRM
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EKP95774.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Th
AMP-dependent synthetase/ligase
13_1_40cm_4_scaffold_853_26
unknown

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23209..24165
DNA (957bp) protein (319aa)

This feature has no annotations

Displaying 26 items

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