ggKbase home page

13_1_40cm_4_scaffold_1628

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1628_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1..111
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJB7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58347.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1628_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

239..562
DNA (324bp) protein (108aa)
Cupin domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG5_NITGG
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AFU58343.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
13_1_40cm_4_scaffold_1628_3
unknown

Not on your lists

comp(596..910)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_4_scaffold_1628_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

947..1180
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59268.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1628_trna_1
unknown

Not on your lists

comp(1258..1332)
DNA (75bp)
transferRNA
13_1_40cm_4_scaffold_1628_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1366..2613)
DNA (1248bp) protein (416aa)
ahcY1; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEZ0_NITGG
13_1_40cm_4_scaffold_1628_6

Not on your lists

comp(2648..3322)
DNA (675bp) protein (225aa)
Phosphoribosyltransferase n=1 Tax=uncultured archaeon RepID=I3RKT6_9ARCH
Phosphoribosyltransferase {ECO:0000313|EMBL:AFK24946.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
phosphoribosyl transferase
13_1_40cm_4_scaffold_1628_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(3788..4939)
DNA (1152bp) protein (384aa)
hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
Hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AFU58337.1}; EC=1.1.1.35 {ECO:0000313|EMBL:AFU58337.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrosospha
Hydroxyacyl-CoA dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJA9_NITGG
13_1_40cm_4_scaffold_1628_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5051..5683
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAJ2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58336.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1628_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5675..6982)
DNA (1308bp) protein (436aa)
Putative helicase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEY5_NITGG
helicase
Putative helicase {ECO:0000313|EMBL:AFU58335.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargen
13_1_40cm_4_scaffold_1628_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7045..7551
DNA (507bp) protein (169aa)
Probable ribosome biogenesis protein Ngar_c13970 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW5_NITGG
hypothetical protein
Probable ribosome biogenesis protein Ngar_c13970 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphae
13_1_40cm_4_scaffold_1628_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7912..8181)
DNA (270bp) protein (90aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84465.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_4_scaffold_1628_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8536..9393)
DNA (858bp) protein (286aa)
Putative DNA adenine methylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEY2_NITGG
DNA adenine methylase rbh
Putative DNA adenine methylase {ECO:0000313|EMBL:AFU58330.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrosos
13_1_40cm_4_scaffold_1628_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9460..9840)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58329.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1628_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10202..10576
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58328.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1628_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10592..11566
DNA (975bp) protein (325aa)
Putative NOL1/NOP2/sun family putative RNA methylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJA1_NITGG
NOL1/NOP2/sun family putative RNA methylase
Putative NOL1/NOP2/sun family putative RNA methylase {ECO:0000313|EMBL:AFU58327.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphae
13_1_40cm_4_scaffold_1628_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11659..12075
DNA (417bp) protein (139aa)
PUA domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAI4_NITGG
PUA domain-containing protein
PUA domain-containing protein {ECO:0000313|EMBL:AFU58326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososp
13_1_40cm_4_scaffold_1628_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12072..12224)
DNA (153bp) protein (51aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14332.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_1628_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12324..13469)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEX8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58325.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_1628_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13532..14380
DNA (849bp) protein (283aa)
cofD; 2-phospho-L-lactate transferase (EC:2.7.8.-)
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:AFU58324.1}; EC=2.7.8.- {ECO:0000313|EMBL:AFU58324.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Ni
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW3_NITGG
13_1_40cm_4_scaffold_1628_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14377..14952
DNA (576bp) protein (192aa)
cofC; 2-phospho-L-lactate guanylyltransferase (EC:2.7.7.68)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=123708
2-phospho-L-lactate guanylyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHE4_NITGG
Displaying 21 items

View Taxonomy