ggKbase home page

13_1_40cm_4_scaffold_2094

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2094_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(86..550)
DNA (465bp) protein (155aa)
DNA-directed RNA polymerase subunit K n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND0_NITGG
rpoK; DNA-directed RNA polymerase subunit K
DNA-directed RNA polymerase subunit K {ECO:0000313|EMBL:AFU59159.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_4_scaffold_2094_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

793..1188
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ80_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59158.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2094_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1178..1504)
DNA (327bp) protein (109aa)
30S ribosomal protein S25e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IKT6_NITGG
rps25e; 30S ribosomal protein S25
30S ribosomal protein S25e {ECO:0000313|EMBL:AFU59157.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
13_1_40cm_4_scaffold_2094_4
unknown

Not on your lists

comp(1608..1751)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_4_scaffold_2094_5
unknown

Not on your lists

comp(1821..2057)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_4_scaffold_2094_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2621..4360
DNA (1740bp) protein (580aa)
lig; DNA ligase (EC:6.5.1.1)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICR2_NITGG
13_1_40cm_4_scaffold_2094_7
unknown

Not on your lists

comp(4357..4569)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_40cm_4_scaffold_2094_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4837..5145
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59154.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2094_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5146..5565)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ74_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59153.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2094_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6075..6671
DNA (597bp) protein (199aa)
Putative O-methyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICQ8_NITGG
O-methyltransferase
Putative O-methyltransferase {ECO:0000313|EMBL:AFU59151.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososph
13_1_40cm_4_scaffold_2094_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7054..7290)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICP6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59141.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2094_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7330..7584
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH08_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59140.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2094_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7655..9367
DNA (1713bp) protein (571aa)
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC6_NITGG
signal transduction histidine kinase, with phosphoacceptor and ATP binding domain
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AFU59139.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaer
13_1_40cm_4_scaffold_2094_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9364..10125
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ57_NITGG
hypothetical protein withCobQ/CobB/MinD/ParA nucleotide binding domain rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59138.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2094_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10207..10446
DNA (240bp) protein (80aa)
Gas vesicle structural protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKS3_NITGG
gvpA2; gas vesicle protein GvpA
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_4_scaffold_2094_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10728..11003
DNA (276bp) protein (92aa)
Gas vesicle structural protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH03_NITGG
gvpJ; gas vesicle protein GvpJ
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_4_scaffold_2094_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

10972..11427
DNA (456bp) protein (152aa)
Gas vesicle protein GcpK n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC5_NITGG
gvpK; gas vesicle protein GcpK
Gas vesicle protein GcpK {ECO:0000313|EMBL:AFU59134.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2094_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11433..12170
DNA (738bp) protein (246aa)
Putative gas vesicle synthesis protein GvpL_GvpF n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ47_NITGG
gas vesicle synthesis protein GvpL_GvpF
Putative gas vesicle synthesis protein GvpL_GvpF {ECO:0000313|EMBL:AFU59133.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;
13_1_40cm_4_scaffold_2094_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

12198..12446
DNA (249bp) protein (83aa)
GvpG-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKS1_NITGG
GvpG-like protein
GvpG-like protein {ECO:0000313|EMBL:AFU59132.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargen
13_1_40cm_4_scaffold_2094_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12517..13374)
DNA (858bp) protein (286aa)
Putative agmatinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC4_NITGG
agmatinase
Putative agmatinase {ECO:0000313|EMBL:AFU59129.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera garg
13_1_40cm_4_scaffold_2094_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13461..14318
DNA (858bp) protein (286aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:AFU59128.1}; EC=4.2.1.55 {ECO:0000313|EMBL:AFU59128.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrosos
3-hydroxybutyryl-CoA dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ40_NITGG
13_1_40cm_4_scaffold_2094_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14319..15311)
DNA (993bp) protein (331aa)
thrB; homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; TaxID=12
Homoserine kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKR7_NITGG
13_1_40cm_4_scaffold_2094_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(15250..16008)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICM9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59126.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2094_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16120..17169
DNA (1050bp) protein (350aa)
Uncharacterized protein family UPF0104 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGY9_NITGG
hypothetical protein
Uncharacterized protein family UPF0104 {ECO:0000313|EMBL:AFU59125.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_1_40cm_4_scaffold_2094_25
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

17196..17993
DNA (798bp) protein (266aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D527_9ARCH
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EIJ66820.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;"
short-chain dehydrogenase/reductase SDR
13_1_40cm_4_scaffold_2094_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(17994..18446)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INC3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59124.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_2094_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18590..19249
DNA (660bp) protein (220aa)
Putative SNF7 protein n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IJ37_NITGG
SNF7 protein rbh
Putative SNF7 protein {ECO:0000313|EMBL:AFU59123.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera ga
13_1_40cm_4_scaffold_2094_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19293..20210)
DNA (918bp) protein (306aa)
glmS1; glucosamine-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glucosamine-fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:AFU59120.1}; EC=2.6.1.16 {ECO:0000313|EMBL:AFU59120.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososph
Glucosamine-fructose-6-phosphate aminotransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGY0_NITGG
Displaying 28 items

View Taxonomy