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13_1_40cm_4_scaffold_5264

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5264_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..732
DNA (732bp) protein (244aa)
Putative acyl-CoA dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB1_NITGG
acyl-CoA dehydrogenase
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:AFU58273.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
13_1_40cm_4_scaffold_5264_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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780..1406
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMV3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58274.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_5264_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1403..2638)
DNA (1236bp) protein (412aa)
argD1; acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000313|EMBL:AFU58275.1}; EC=2.6.1.11 {ECO:0000313|EMBL:AFU58275.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrosos
Acetylornithine aminotransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IET6_NITGG
13_1_40cm_4_scaffold_5264_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2722..3189)
DNA (468bp) protein (156aa)
Putative protease n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ75_NITGG
protease
Putative protease {ECO:0000313|EMBL:AFU58277.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargen
13_1_40cm_4_scaffold_5264_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3231..3506)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58278.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_5264_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3623..4441)
DNA (819bp) protein (273aa)
glnA1; glutamate--ammonia ligase (EC:6.3.1.2)
Glutamate--ammonia ligase {ECO:0000313|EMBL:AFU58281.1}; EC=6.3.1.2 {ECO:0000313|EMBL:AFU58281.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaerace
Glutamate--ammonia ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAD9_NITGG
13_1_40cm_4_scaffold_5264_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5112..5555
DNA (444bp) protein (148aa)
Putative HTH-type transcriptional regulator n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ76_NITGG
putative HTH-type transcriptional regulator
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:AIC15450.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sour
13_1_40cm_4_scaffold_5264_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5625..6599
DNA (975bp) protein (325aa)
Transcription initiation factor IIB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHB4_NITGG
tfb4; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000313|EMBL:AFU58283.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nit
13_1_40cm_4_scaffold_5264_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6932..9244)
DNA (2313bp) protein (771aa)
Putative phosphoribosylamine-glycine ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMV9_NITGG
Putative phosphoribosylamine-glycine ligase {ECO:0000313|EMBL:AFU58304.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sou
phosphoribosylamine-glycine ligase rbh
13_1_40cm_4_scaffold_5264_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9330..9569
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEW0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58305.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_5264_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9847..10269
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIS4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16911.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_4_scaffold_5264_12
unknown

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10881..11237
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_4_scaffold_5264_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11572..12330
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INZ3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60224.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_5264_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(13732..14193)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ91_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58307.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_4_scaffold_5264_15
unknown

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comp(14619..14807)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_4_scaffold_5264_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15228..16472
DNA (1245bp) protein (415aa)
Transporter, major facilitator family protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D0U0_9ARCH
arabinose efflux permease family protein rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:AIF84826.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_4_scaffold_5264_17
Candidatus Nitrosopumilus salaria, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(16765..18081)
DNA (1317bp) protein (439aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D509_9ARCH
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIJ66802.1}; TaxID=859350 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nit
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Displaying 17 items

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