ggKbase home page

13_1_40cm_4_scaffold_674

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_674_1
Leptospira licerasiae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

265..1341
DNA (1077bp) protein (359aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Leptospira licerasiae RepID=I0XSX8_9LEPT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EIE01986.1}; TaxID=1049972 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira licerasiae se
13_1_40cm_4_scaffold_674_2
unknown

Not on your lists

1338..1661
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_4_scaffold_674_3
unknown

Not on your lists

comp(1835..2179)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_4_scaffold_674_4
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

2337..2732
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B50A80
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
13_1_40cm_4_scaffold_674_5
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3233..5821
DNA (2589bp) protein (863aa)
HYR domain protein {ECO:0000313|EMBL:CEG29338.1}; Flags: Precursor;; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
13_1_40cm_4_scaffold_674_6
unknown

Not on your lists

comp(5702..5953)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_674_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6036..6257)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQ39_RHOPX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS34992.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
13_1_40cm_4_scaffold_674_8
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6318..6671
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9BAS2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EED98974.1}; TaxID=513051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
hypothetical protein
13_1_40cm_4_scaffold_674_9
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6628..7203
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0G3M5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFO66359.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCAD
hypothetical protein
13_1_40cm_4_scaffold_674_10
unknown

Not on your lists

comp(7355..7699)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_4_scaffold_674_11
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

7856..8251
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B50A80
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
13_1_40cm_4_scaffold_674_12
unknown

Not on your lists

8626..8958
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_40cm_4_scaffold_674_13
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9034..9459
DNA (426bp) protein (142aa)
PhnB protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHD4_9PROT
PhnB protein {ECO:0000313|EMBL:CCU62701.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
DGPFAETKE family protein
13_1_40cm_4_scaffold_674_14
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9582..9977
DNA (396bp) protein (132aa)
YCII--like protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FEU8_VERMA
Uncharacterized protein {ECO:0000313|EMBL:ETK37627.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_1_40cm_4_scaffold_674_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10046..11326
DNA (1281bp) protein (427aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKH1_SORC5
ECF subfamily RNA polymerase sigma factor
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:CAN96584.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;
13_1_40cm_4_scaffold_674_16
unknown

Not on your lists

11595..11888
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_4_scaffold_674_17
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11845..12717)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MPN3_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE05392.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_1_40cm_4_scaffold_674_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12842..13642)
DNA (801bp) protein (267aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94248.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
13_1_40cm_4_scaffold_674_19
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13708..14439)
DNA (732bp) protein (244aa)
Short-chain dehydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FD64_9RHIZ
Short-chain dehydrogenase {ECO:0000313|EMBL:ESX68128.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
short chain dehydrogenase
13_1_40cm_4_scaffold_674_20
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14529..14849)
DNA (321bp) protein (107aa)
Transcriptional regulator, HxlR family n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R248_SPISS
MarR family transcriptional regulator {ECO:0000313|EMBL:EWY40080.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="S
HxlR family transcriptional regulator
13_1_40cm_4_scaffold_674_21
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15056..15850)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S465_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP42704.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basile
hypothetical protein
13_1_40cm_4_scaffold_674_22
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15897..16658)
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Burkholderia RepID=K0DVC7_9BURK
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADX58025.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholde
13_1_40cm_4_scaffold_674_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16771..17991
DNA (1221bp) protein (407aa)
Putative transcriptional regulator, CadC n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS17_KORVE
transcriptional regulator CadC
Putative transcriptional regulator, CadC {ECO:0000313|EMBL:ABF40333.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_4_scaffold_674_24
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

18001..18684
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IW63_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
SMP-30/Gluconolaconase/LRE-like region family protein
13_1_40cm_4_scaffold_674_25
unknown

Not on your lists

18776..18838
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 25 items

View Taxonomy