name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_4_scaffold_1653_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(1..309)
|
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=12555329 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L19
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13_1_40cm_4_scaffold_1653_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(296..1090)
|
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=24448829 bin=RBG_19FT_COMBO_GAL15_69_19 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
trmD; tRNA (guanine-N(1)-)-methyltransferase
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13_1_40cm_4_scaffold_1653_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(1102..1635)
|
ribosome maturation factor rimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
16S rRNA-processing protein RimM id=12555331 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
16S rRNA processing protein RimM
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|
13_1_40cm_4_scaffold_1653_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(1763..2008)
|
hypothetical protein; K06960 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein; K06960 id=12555332 bin=CNBR_ACIDO species=Clostridium sp. CAG:43 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA binding protein
|
|
13_1_40cm_4_scaffold_1653_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria
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Not on your lists |
comp(2162..2458)
|
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=12555333 bin=CNBR_ACIDO species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S16
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13_1_40cm_4_scaffold_1653_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(2551..3924)
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signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 id=12555334 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal recognition particle subunit FFH/SRP54 (srp54)
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13_1_40cm_4_scaffold_1653_7
unknown
|
Not on your lists |
comp(4118..4399)
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This feature has no annotations |
|
13_1_40cm_4_scaffold_1653_8
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(4509..4778)
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Thiol-disulfide oxidoreductase DCC n=1 Tax=Paenibacillus lactis 154 RepID=G4HMG8_9BACL
Thiol-disulfide oxidoreductase DCC {ECO:0000313|EMBL:EHB54495.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;
hypothetical protein
|
|
13_1_40cm_4_scaffold_1653_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(4897..6144)
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GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:3.5.4.25 4.1.2.-); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFC
GTP cyclohydrolase II; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=12555336 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
3,4-dihydroxy-2-butanone 4-phosphate synthase
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13_1_40cm_4_scaffold_1653_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(6128..6754)
|
ribE; Riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] id=12555337 bin=CNBR_ACIDO species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribE; riboflavin synthase subunit alpha
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13_1_40cm_4_scaffold_1653_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(6735..7799)
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ribD; riboflavin biosynthesis protein RibD; K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] Tax=RIFCSPLOWO2_12_
riboflavin biosynthesis protein RibD id=12555338 bin=CNBR_ACIDO species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pyrimidine reductase and pyrimidine deaminase
|
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13_1_40cm_4_scaffold_1653_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(7933..8856)
|
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor id=12555339 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ftsY; signal recognition particle GTPase FtsY
|
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13_1_40cm_4_scaffold_1653_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(8998..10002)
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gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
gpsA; glycerol-3-phosphate dehydrogenase (NAD+ dependent); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] id=12555340 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
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13_1_40cm_4_scaffold_1653_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(10002..10586)
|
acyl-phosphate glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HAN6_9RHOB
hypothetical protein
|
|
13_1_40cm_4_scaffold_1653_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(10583..11158)
|
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] id=14430507 bin=bin3_NC10 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
LigT; 2'-5' RNA ligase
|
|
13_1_40cm_4_scaffold_1653_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(11209..12465)
|
competence/damage-inducible protein CinA C-terminal domain-containing protein; K03742 competence/damage-inducible protein CinA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
competence/damage-inducible protein CinA C-terminal domain-containing protein; K03742 competence/damage-inducible protein CinA id=12554175 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
competence/damage-inducible protein CinA C-terminal domain-containing protein
|
|
13_1_40cm_4_scaffold_1653_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(12538..13002)
|
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] id=12554176 bin=CNBR_ACIDO species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphatidylglycerophosphatase A Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
phosphatidylglycerophosphatase A
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13_1_40cm_4_scaffold_1653_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(13007..13909)
|
hypothetical protein id=14625969 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RDD domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
|
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13_1_40cm_4_scaffold_1653_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(13906..14739)
|
id=12554178 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12554178 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
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13_1_40cm_4_scaffold_1653_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria
|
Not on your lists |
14871..15770
|
glutamate formiminotransferase; K00603 glutamate formiminotransferase [EC:2.1.2.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glutamate formiminotransferase (EC:4.3.1.4)
Glutamate formiminotransferase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T6Z5_THEIA
|
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13_1_40cm_4_scaffold_1653_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(15880..17328)
|
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX id=12554180 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
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13_1_40cm_4_scaffold_1653_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(17350..19677)
|
PAS/PAC sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] id=12554181 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sensor histidine kinase (EC:2.7.13.3)
ntrY; nitrogen regulation sensor histidine kinase NtrY Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
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13_1_40cm_4_scaffold_1653_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(19830..20456)
|
id=12554182 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
id=12554182 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
|
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13_1_40cm_4_scaffold_1653_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(20464..20922)
|
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR id=12554183 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nrdR; transcriptional regulator NrdR
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13_1_40cm_4_scaffold_1653_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
comp(20927..21973)
|
hypothetical protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein; K07027 id=12554184 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
|
|
13_1_40cm_4_scaffold_1653_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria
|
Not on your lists |
22074..22991
|
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=12554186 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
|
|
13_1_40cm_4_scaffold_1653_27
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
22988..23197
|
response regulator receiver protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
response regulator receiver protein id=12554187 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
response regulator receiver protein
|
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13_1_40cm_4_scaffold_1653_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria
|
Not on your lists |
23349..23588
|
Co-chaperonin GroES (HSP10); K04078 chaperonin GroES Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
chaperonin Cpn10; K04078 chaperonin GroES id=12554188 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chaperonin Cpn10
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