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13_1_40cm_4_scaffold_769

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_769_1
RBG_16_Archaea_50_20_curated, Archaea

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1..177
DNA (177bp) protein (59aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_4_scaffold_769_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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177..650
DNA (474bp) protein (158aa)
Prefoldin subunit alpha n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDA_METKA
GIM5; prefoldin subunit alpha; K04797 prefoldin alpha subunit Tax=RBG_13_Bathyarchaeota_38_9_curated
GIM5; prefoldin subunit alpha
13_1_40cm_4_scaffold_769_3
RBG_16_Archaea_50_20_curated, Archaea

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643..1548
DNA (906bp) protein (302aa)
Signal recognition particle receptor FtsY n=1 Tax=Thermococcus sp. CL1 RepID=I3ZRA0_9EURY
signal recognition particle GTPase Tax=RBG_16_Archaea_50_20_curated
signal recognition particle GTPase
13_1_40cm_4_scaffold_769_4
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(1610..1879)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4I4_9ARCH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ47203.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum
13_1_40cm_4_scaffold_769_5
RBG_16_Archaea_50_20_curated, Archaea

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2322..2816
DNA (495bp) protein (165aa)
Transcription elongation factor Spt5 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B924_METTP
nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=RBG_16_Archaea_50_20_curated
nusG; transcription antitermination protein NusG
13_1_40cm_4_scaffold_769_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2890..3282
DNA (393bp) protein (131aa)
50S ribosomal protein L11 n=1 Tax=Thermofilum sp. 1910b RepID=S5ZCQ7_9CREN
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_13_Bathyarchaeota_38_9_curated
LSU ribosomal protein L12e (L11p)
13_1_40cm_4_scaffold_769_7
RBG_16_Archaea_50_20_curated, Archaea

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3295..3954
DNA (660bp) protein (220aa)
50S ribosomal protein L1 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB5_METFV
50S ribosomal protein L1 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L1
13_1_40cm_4_scaffold_769_8
RBG_16_Archaea_50_20_curated, Archaea

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3960..4529
DNA (570bp) protein (190aa)
50S ribosomal protein L10 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEN6_PYRF1
rpl10p; acidic ribosomal protein P0 Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L10
13_1_40cm_4_scaffold_769_9
RBG_16_Archaea_50_20_curated, Archaea

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4920..5228
DNA (309bp) protein (103aa)
50S ribosomal protein L12 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=RL12_PYRHO
rpl12p; 50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 Tax=RBG_16_Archaea_50_20_curated
rpl12p; 50S ribosomal protein L12
13_1_40cm_4_scaffold_769_10
RBG_16_Archaea_50_20_curated, Archaea

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5347..8130
DNA (2784bp) protein (928aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RBG_16_Archaea_50_20_curated
Alanine--tRNA ligase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKE3_THELI
alanyl-tRNA synthetase
13_1_40cm_4_scaffold_769_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8134..11052
DNA (2919bp) protein (973aa)
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=926571 species="Archaea; Thaumarc
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=14427140 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_4_scaffold_769_12
unknown

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comp(11059..11349)
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_4_scaffold_769_13
unknown

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comp(11493..11696)
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_4_scaffold_769_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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11870..12937
DNA (1068bp) protein (356aa)
Fmu (Sun) domain-containing protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_38_9_curated
Fmu (Sun) domain protein n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SPP1_IGNAA
Fmu (Sun) domain-containing protein
13_1_40cm_4_scaffold_769_15
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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13027..14142
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30161_ARCFU
Single-stranded DNA-specific exonuclease
Uncharacterized protein {ECO:0000313|EMBL:AAB91152.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (s
13_1_40cm_4_scaffold_769_16
unknown

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14161..14709
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_4_scaffold_769_17
unknown

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comp(14795..14950)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_40cm_4_scaffold_769_18
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(15504..17090)
DNA (1587bp) protein (529aa)
1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:BAJ47633.1}; EC=1.5.1.12 {ECO:0000313|EMBL:BAJ47633.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatu
1-pyrroline-5-carboxylate dehydrogenase n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5R4_9ARCH
13_1_40cm_4_scaffold_769_19
RBG_16_Archaea_50_20_curated, Archaea

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comp(17586..18182)
DNA (597bp) protein (199aa)
PyrE-like protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T646_METSL
Orotate phosphoribosyltransferase protein Tax=RBG_16_Archaea_50_20_curated
PyrE-like protein
13_1_40cm_4_scaffold_769_20
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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18314..19462
DNA (1149bp) protein (383aa)
nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:AGT35543.1}; EC=6.3.4.21 {ECO:0000313|EMBL:AGT35543.1};; TaxID=1365176 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofila
Nicotinate phosphoribosyltransferase n=1 Tax=Thermofilum sp. 1910b RepID=S5ZEM0_9CREN
13_1_40cm_4_scaffold_769_21
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(19459..19974)
DNA (516bp) protein (172aa)
Putative nucleic acid-binding protein with PIN domain and Zn ribbon n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T9X9_9EURY
PilT protein domain protein; K07060 UPF0271 protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
Nob1p-like protein
13_1_40cm_4_scaffold_769_22
RBG_16_Archaea_50_20_curated, Archaea

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comp(19971..20810)
DNA (840bp) protein (280aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] Tax=RBG_16_Archaea_50_20_curated
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=PPNK_METST
13_1_40cm_4_scaffold_769_23
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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20924..21319
DNA (396bp) protein (132aa)
Translation initiation factor 5A n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEJ4_PYRF1
eIF-5A; translation initiation factor 5A Tax=RBG_16_Bathyarchaeota_48_13_curated
translation initiation factor eIF-5A
13_1_40cm_4_scaffold_769_24
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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21378..22292
DNA (915bp) protein (305aa)
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RBG_16_Bathyarchaeota_48_13_curated
deoxyhypusine synthase (EC:2.5.1.46)
Probable deoxyhypusine synthase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GX03_METFV
13_1_40cm_4_scaffold_769_25
RBG_16_Archaea_50_20_curated, Archaea

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22294..23616
DNA (1323bp) protein (441aa)
Signal recognition particle 54 kDa protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFZ7_9EURY
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=RBG_16_Archaea_50_20_curated
Signal recognition particle GTPase
13_1_40cm_4_scaffold_769_26
Thermoplasmatales archaeon I-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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24162..24893
DNA (732bp) protein (244aa)
GTP cyclohydrolase-2 {ECO:0000256|HAMAP-Rule:MF_00179}; EC=3.5.4.25 {ECO:0000256|HAMAP-Rule:MF_00179};; GTP cyclohydrolase II {ECO:0000256|HAMAP-Rule:MF_00179}; TaxID=667138 species="Archaea; Euryarch
GTP cyclohydrolase-2 n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LNU5_9EURY
GTP cyclohydrolase
13_1_40cm_4_scaffold_769_27
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(24898..25209)
DNA (312bp) protein (104aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LPX1_9EURY
sortase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
N-acetyltransferase
13_1_40cm_4_scaffold_769_28
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(25473..25994)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI000375BB7F
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AIF84056.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaer
13_1_40cm_4_scaffold_769_29
unknown

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comp(26216..26740)
DNA (525bp) protein (175aa)

This feature has no annotations

13_1_40cm_4_scaffold_769_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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27518..27826
DNA (309bp) protein (103aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
Displaying items 1-30 of 51 in total

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