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13_1_40cm_4_scaffold_1519

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1519_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(108..821)
DNA (714bp) protein (238aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_4_scaffold_1519_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(821..1477)
DNA (657bp) protein (219aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ErfK/YbiS/YcfS/YnhG family protein id=24406648 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ErfK/YbiS/YcfS/YnhG family protein
13_1_40cm_4_scaffold_1519_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1484..2689)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA77_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1519_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2691..3314)
DNA (624bp) protein (208aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Putative uncharacterized protein id=4943420 bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
13_1_40cm_4_scaffold_1519_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3469..3684)
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_4_scaffold_1519_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4205..4594
DNA (390bp) protein (130aa)
putative ribonuclease P, protein component (EC:3.1.26.5); K03536 ribonuclease P protein component [EC:3.1.26.5] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative ribonuclease P, protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA79_9BACT
13_1_40cm_4_scaffold_1519_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4914..6713
DNA (1800bp) protein (600aa)
Membrane protein insertase YidC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA80_9BACT
oxaA; inner-membrane protein insertion factor OxaA rbh
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
13_1_40cm_4_scaffold_1519_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6726..8138
DNA (1413bp) protein (471aa)
trmE; tRNA modification GTPase; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tRNA modification GTPase MnmE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA81_9BACT
trmE; tRNA modification GTPase rbh
13_1_40cm_4_scaffold_1519_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8185..10089
DNA (1905bp) protein (635aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA82_9BACT
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=330214 species="Bacter
13_1_40cm_4_scaffold_1519_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10203..10868
DNA (666bp) protein (222aa)
gidB; methyltransferase GidB (EC:2.1.-.-); K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
gidB; methyltransferase GidB (EC:2.1.-.-)
Glucose inhibited division protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2ACE7
13_1_40cm_4_scaffold_1519_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10946..11722
DNA (777bp) protein (259aa)
Chromosomal partitioning ATPase ParA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA84_9BACT
parA; chromosomal partitioning ATPase ParA; K03496 chromosome partitioning protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
parA; chromosomal partitioning ATPase ParA
13_1_40cm_4_scaffold_1519_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11700..12548
DNA (849bp) protein (283aa)
Chromosomal partitioning protein ParB n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA85_9BACT
parB; chromosomal partitioning protein ParB; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
parB; chromosomal partitioning protein ParB
13_1_40cm_4_scaffold_1519_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12740..13195
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA87_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1519_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13209..14285
DNA (1077bp) protein (359aa)
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA88_9BACT
13_1_40cm_4_scaffold_1519_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14414..14953
DNA (540bp) protein (180aa)
putative ATP synthase F1 subunit delta (EC:3.6.3.14)
putative ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ATP synthase subunit delta n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA89_9BACT
13_1_40cm_4_scaffold_1519_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14957..16477
DNA (1521bp) protein (507aa)
atpA; ATP synthase F1 subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
atpA; ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA90_9BACT
13_1_40cm_4_scaffold_1519_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16607..17404
DNA (798bp) protein (266aa)
atpG; ATP synthase F1 subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
atpG; ATP synthase F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA91_9BACT
13_1_40cm_4_scaffold_1519_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17461..18906
DNA (1446bp) protein (482aa)
atpD; ATP synthase F1 subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
atpD; ATP synthase F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA92_9BACT
13_1_40cm_4_scaffold_1519_19
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

18985..19398
DNA (414bp) protein (138aa)
atpC; ATP synthase F1 subunit epsilon (EC:3.6.3.14); K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
atpC; ATP synthase F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA93_9BACT
13_1_40cm_4_scaffold_1519_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(19340..19780)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJI5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
Displaying 20 items

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