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13_1_40cm_4_scaffold_1967

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1967_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2..679
DNA (678bp) protein (226aa)
proA; gamma-glutamylphosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
proA; gamma-glutamylphosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGY7_9BACT
13_1_40cm_4_scaffold_1967_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

828..2603
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGY6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein rbh
13_1_40cm_4_scaffold_1967_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2816..3394
DNA (579bp) protein (193aa)
pyrR; bifunctional protein PyrR (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrR; bifunctional protein PyrR (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG60_9BACT
13_1_40cm_4_scaffold_1967_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3391..4311
DNA (921bp) protein (307aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2); K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG61_9BACT
13_1_40cm_4_scaffold_1967_5
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4429..4797)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD42644.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
13_1_40cm_4_scaffold_1967_6
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4868..5116)
DNA (249bp) protein (83aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
13_1_40cm_4_scaffold_1967_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5524..5670
DNA (147bp) protein (49aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000313|EMBL:CBK42249
Dihydroorotase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG62_9BACT
13_1_40cm_4_scaffold_1967_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5685..6212
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG63_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1967_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6209..7390
DNA (1182bp) protein (394aa)
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG64_9BACT
13_1_40cm_4_scaffold_1967_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7383..8351
DNA (969bp) protein (323aa)
putative signal peptide peptidase SppA (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative signal peptide peptidase SppA (EC:3.4.21.-)
Putative Signal peptide peptidase SppA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG65_9BACT
13_1_40cm_4_scaffold_1967_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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8412..9368
DNA (957bp) protein (319aa)
Putative Peptidase M48, Ste24p n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG66_9BACT
putative peptidase M48, Ste24p
Putative Peptidase M48, Ste24p {ECO:0000313|EMBL:CBK42253.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_1967_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9381..12632
DNA (3252bp) protein (1084aa)
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116, ECO:0000313|EMBL:CBK42254.1};; TaxID=330214 species="Bacteria; Nitrospi
Carbamoyl-phosphate synthase large chain n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG67_9BACT
13_1_40cm_4_scaffold_1967_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12667..13143
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG68_9BACT
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=330214 species="Bacteria
13_1_40cm_4_scaffold_1967_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13254..14054
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG69_9BACT
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_1967_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14266..16272)
DNA (2007bp) protein (669aa)
glycosyl hydrolase, glucoamylase (EC:3.2.1.3) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
glycosyl hydrolase, glucoamylase (EC:3.2.1.3)
Similar to glucoamylase id=4827255 bin=GWC2_Deltaproteobacteria_66_88 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_1967_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16388..17755)
DNA (1368bp) protein (456aa)
bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62); K00833 adenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_cu
bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG72_9BACT
13_1_40cm_4_scaffold_1967_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17879..19678
DNA (1800bp) protein (600aa)
Elongation factor 4 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG73_9BACT
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lepA; GTP-binding protein LepA
13_1_40cm_4_scaffold_1967_18
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

19681..20466
DNA (786bp) protein (262aa)
lepB; signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG74_9BACT
13_1_40cm_4_scaffold_1967_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

20436..21500
DNA (1065bp) protein (355aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-)
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG75_9BACT
13_1_40cm_4_scaffold_1967_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

21493..22293
DNA (801bp) protein (267aa)
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG76_9BACT
13_1_40cm_4_scaffold_1967_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

22294..23898
DNA (1605bp) protein (535aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG77_9BACT
13_1_40cm_4_scaffold_1967_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

23934..24773
DNA (840bp) protein (280aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG78_9BACT
13_1_40cm_4_scaffold_1967_23
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

24770..25729
DNA (960bp) protein (320aa)
kdsD; arabinose-5-phosphate isomerase (EC:5.3.1.13)
Arabinose-5-phosphate isomerase {ECO:0000313|EMBL:CBK42266.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CBK42266.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" sou
Arabinose-5-phosphate isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG79_9BACT
13_1_40cm_4_scaffold_1967_24
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

25769..26389
DNA (621bp) protein (207aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFCSPLOWO2_02_FULL_Ni
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG80_9BACT
13_1_40cm_4_scaffold_1967_25
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

26417..27016
DNA (600bp) protein (200aa)
plsY; hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PG81_9BACT
plsY; hypothetical protein
13_1_40cm_4_scaffold_1967_26
unknown

Not on your lists

comp(27041..27622)
DNA (582bp) protein (194aa)

This feature has no annotations

Displaying 26 items

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