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13_1_40cm_4_scaffold_293

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_293_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(1..855)
DNA (855bp) protein (285aa)
putative oxidoreductase (EC:1.-.-.-) Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
putative oxidoreductase (EC:1.-.-.-)
Putative Oxidoreductase, Gfo/Idh/MocA family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHJ7_9BACT
13_1_40cm_4_scaffold_293_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(943..1800)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHJ8_9BACT
hypothetical protein; K09949 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_293_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1806..2612)
DNA (807bp) protein (269aa)
lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_cur
lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHJ9_9BACT
13_1_40cm_4_scaffold_293_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2710..3195)
DNA (486bp) protein (162aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK0_9BACT
13_1_40cm_4_scaffold_293_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3203..3745)
DNA (543bp) protein (181aa)
Putative Outer membrane chaperone Skp n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK1_9BACT
putative periplasmic chaperone Skp; K06142 outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative outer membrane chaperone Skp
13_1_40cm_4_scaffold_293_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3856..4434)
DNA (579bp) protein (193aa)
Putative Outer membrane chaperone Skp n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK2_9BACT
putative outer membrane chaperone Skp
Putative Outer membrane chaperone Skp {ECO:0000313|EMBL:CBK42739.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_293_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4593..6821)
DNA (2229bp) protein (743aa)
Putative Outer membrane protein assembly factor YaeT n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK3_9BACT
putative outer membrane protein assembly factor YaeT; K07277 outer membrane protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative outer membrane protein assembly factor YaeT
13_1_40cm_4_scaffold_293_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7181..8050
DNA (870bp) protein (290aa)
galU; UTP--glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
galU; UTP--glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK4_9BACT
13_1_40cm_4_scaffold_293_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8159..10642
DNA (2484bp) protein (828aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK5_9BACT
13_1_40cm_4_scaffold_293_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10740..11741
DNA (1002bp) protein (334aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16); K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiL; thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK6_9BACT
13_1_40cm_4_scaffold_293_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11729..12223
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK7_9BACT
hypothetical protein; K09928 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_293_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

12310..13731
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHK8_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_40cm_4_scaffold_293_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13807..14400)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YC72_9DELT
outer membrane protein Slp; K07285 outer membrane lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_4_scaffold_293_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14469..15344)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_293_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15404..16780)
DNA (1377bp) protein (459aa)
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL3_9BACT
hypothetical protein
13_1_40cm_4_scaffold_293_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16847..17530)
DNA (684bp) protein (228aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
psmA; proteasome subunit alpha (EC:3.4.25.1)
Proteasome, alpha subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL4_9BACT
13_1_40cm_4_scaffold_293_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(17533..18354)
DNA (822bp) protein (274aa)
psmB; proteasome subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
psmB; proteasome subunit beta (EC:3.4.25.1)
Proteasome, beta subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL5_9BACT
13_1_40cm_4_scaffold_293_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(18433..19908)
DNA (1476bp) protein (492aa)
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL6_9BACT
hypothetical protein
13_1_40cm_4_scaffold_293_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(19965..21734)
DNA (1770bp) protein (590aa)
pan; proteasome-associated ATPase (EC:3.6.-.-); K13527 proteasome-associated ATPase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
pan; proteasome-associated ATPase (EC:3.6.-.-)
Proteasome-associated ATPase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL7_9BACT
13_1_40cm_4_scaffold_293_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(21845..22477)
DNA (633bp) protein (211aa)
thiE2; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiE2; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHL8_9BACT
13_1_40cm_4_scaffold_293_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(22584..23357)
DNA (774bp) protein (258aa)
thiazole synthase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B0A9
thiG; thiazole biosynthesis protein thiG; K03149 thiamine biosynthesis ThiG Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiG; thiazole biosynthesis protein thiG
13_1_40cm_4_scaffold_293_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(23421..23657)
DNA (237bp) protein (79aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM0_9BACT
thiS; thiamine biosynthesis protein thiS; K03154 sulfur carrier protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thiS; thiamine biosynthesis protein thiS
13_1_40cm_4_scaffold_293_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

23839..24312
DNA (474bp) protein (158aa)
Putative DNA polymerase IV, family X (N-terminal) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM2_9BACT
putative DNA polymerase IV Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative DNA polymerase IV
13_1_40cm_4_scaffold_293_24
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(24395..25723)
DNA (1329bp) protein (443aa)
ctpA; C-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ctpA; C-terminal-processing protease (EC:3.4.21.102)
C-terminal-processing protease n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM3_9BACT
13_1_40cm_4_scaffold_293_25
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(25750..26949)
DNA (1200bp) protein (400aa)
Putative Murein hydrolase EnvC n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM4_9BACT
putative murein hydrolase EnvC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative murein hydrolase EnvC
13_1_40cm_4_scaffold_293_26
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(26946..27845)
DNA (900bp) protein (300aa)
Cell division protein FtsX n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM5_9BACT
putative cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative cell division protein FtsX
13_1_40cm_4_scaffold_293_27
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(27842..28510)
DNA (669bp) protein (223aa)
ftsE; cell division protein FtsE (EC:3.6.3.-); K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ftsE; cell division protein FtsE (EC:3.6.3.-)
Cell division protein FtsE n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM6_9BACT
13_1_40cm_4_scaffold_293_28
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(28778..29164)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B193
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_293_29
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(29165..29785)
DNA (621bp) protein (207aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM8_9BACT
13_1_40cm_4_scaffold_293_30
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


comp(29857..30300)
DNA (444bp) protein (148aa)
50S ribosomal protein L19 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHM9_9BACT
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
rplS; 50S ribosomal protein L19
Displaying items 1-30 of 40 in total

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