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13_1_40cm_4_scaffold_3216

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3216_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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22..336
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA48_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40107.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_3216_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

368..802
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA47_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_3216_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

865..1689
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA46_9BACT
hypothetical protein; K06966 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_3216_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1686..3083
DNA (1398bp) protein (466aa)
Putative RNA-metabolising metallo-beta-lactamase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA45_9BACT
putative RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative RNA-metabolising metallo-beta-lactamase
13_1_40cm_4_scaffold_3216_5
unknown

Not on your lists

3121..3489
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_4_scaffold_3216_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3514..4731
DNA (1218bp) protein (406aa)
dmpA; peptidase S58 (EC:3.4.11.-); K01266 D-aminopeptidase [EC:3.4.11.19] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
dmpA; peptidase S58 (EC:3.4.11.-)
Peptidase S58 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA44_9BACT
13_1_40cm_4_scaffold_3216_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4870..5097
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA43_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_3216_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5112..6320
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA42_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_3216_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6407..7522
DNA (1116bp) protein (372aa)
gcvT; glycine cleavage system aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protei
Aminomethyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA40_9BACT
13_1_40cm_4_scaffold_3216_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7598..8125
DNA (528bp) protein (176aa)
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13); K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
nudF; ADP-ribose pyrophosphatase (EC:3.6.1.13)
ADP-ribose pyrophosphatase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA39_9BACT
13_1_40cm_4_scaffold_3216_11
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(8377..9462)
DNA (1086bp) protein (362aa)
peptidylarginine deiminase-like protein (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
peptidylarginine deiminase-like protein (EC:3.5.3.12)
Peptidylarginine deiminase-like enzyme id=1789003 bin=GWB2_Deltaproteobacteria_65_81 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_4_scaffold_3216_12
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(9447..10370)
DNA (924bp) protein (308aa)
aguB; N-carbamoylputrescine amidase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase id=2854538 bin=GWC2_Deltaproteobacteria_66_88 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
aguB; N-carbamoylputrescine amidase
13_1_40cm_4_scaffold_3216_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10445..11365)
DNA (921bp) protein (307aa)
rbsK; ribokinase (EC:2.7.1.15)
Ribokinase {ECO:0000313|EMBL:CBK40094.1}; EC=2.7.1.15 {ECO:0000313|EMBL:CBK40094.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitro
Ribokinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA35_9BACT
13_1_40cm_4_scaffold_3216_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11353..12342)
DNA (990bp) protein (330aa)
rih; inosine-uridine preferring nucleoside hydrolase (EC:3.2.2.1) rbh
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:CBK40093.1}; EC=3.2.2.1 {ECO:0000313|EMBL:CBK40093.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Ni
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA34_9BACT
13_1_40cm_4_scaffold_3216_15
unknown

Not on your lists

comp(12405..12812)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_40cm_4_scaffold_3216_16
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13080..13298)
DNA (219bp) protein (73aa)
heavy metal efflux pump CzcA Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
Heavy metal efflux pump CzcA id=3611299 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
CzcA family heavy metal efflux protein
Displaying 16 items

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