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13_1_40cm_4_scaffold_3354

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3354_1
unknown

Not on your lists

comp(3..182)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_4_scaffold_3354_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(154..1683)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8F5_9BACT
yjeF; hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
yjeF; hypothetical protein
13_1_40cm_4_scaffold_3354_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(2267..2980)
DNA (714bp) protein (238aa)
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8F4_9BACT
13_1_40cm_4_scaffold_3354_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3291..4481
DNA (1191bp) protein (397aa)
yfdZ; pLp-dependent aminotransferase (EC:2.6.1.-); K14261 alanine-synthesizing transaminase [EC:2.6.1.-] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
yfdZ; pLp-dependent aminotransferase (EC:2.6.1.-)
PLP-dependent aminotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8F2_9BACT
13_1_40cm_4_scaffold_3354_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4478..5791
DNA (1314bp) protein (438aa)
hom; homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8F1_9BACT
13_1_40cm_4_scaffold_3354_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5842..6900
DNA (1059bp) protein (353aa)
thrC2; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
thrC2; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8F0_9BACT
13_1_40cm_4_scaffold_3354_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6917..8173
DNA (1257bp) protein (419aa)
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_1
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8E9_9BACT
13_1_40cm_4_scaffold_3354_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

8186..9409
DNA (1224bp) protein (408aa)
lysC; aspartokinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
lysC; aspartokinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8E8_9BACT
13_1_40cm_4_scaffold_3354_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10004..10996
DNA (993bp) protein (331aa)
2-isopropylmalate synthase (EC:2.3.3.-); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
2-isopropylmalate synthase (EC:2.3.3.-)
2-isopropylmalate/homocitrate synthase-family transferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8E7_9BACT
13_1_40cm_4_scaffold_3354_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11118..11390
DNA (273bp) protein (91aa)
Integration host factor, alpha subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8E6_9BACT
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ihfA; integration host factor subunit alpha
13_1_40cm_4_scaffold_3354_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11563..11739
DNA (177bp) protein (59aa)
Transcriptional regulator, MerR family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8E5_9BACT
MerR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
MerR family transcriptional regulator
Displaying 11 items

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