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13_1_40cm_4_scaffold_3498

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3498_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2..385)
DNA (384bp) protein (128aa)
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Leptospirillum sp. Group IV 'UBA BS' RepID=T0XUQ5_9BACT
rsmI; Ribosomal RNA small subunit methyltransferase I
13_1_40cm_4_scaffold_3498_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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522..1061
DNA (540bp) protein (180aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
NUDIX hydrolase (Modular protein) id=1969969 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NUDIX hydrolase
13_1_40cm_4_scaffold_3498_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1157..1960
DNA (804bp) protein (268aa)
Putative Cytochrome c biogenesis protein CcsA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR5_9BACT
putative cytochrome c biogenesis protein CcsA Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative cytochrome c biogenesis protein CcsA
13_1_40cm_4_scaffold_3498_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1981..3363
DNA (1383bp) protein (461aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR4_9BACT
13_1_40cm_4_scaffold_3498_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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3399..3722
DNA (324bp) protein (108aa)
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
13_1_40cm_4_scaffold_3498_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3737..4672
DNA (936bp) protein (312aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR3_9BACT
13_1_40cm_4_scaffold_3498_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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4681..6228
DNA (1548bp) protein (516aa)
hemD; porphyrin biosynthesis protein HemD (EC:2.1.1.107 4.2.1.75)
Porphyrin biosynthesis protein HemD {ECO:0000313|EMBL:CBK42449.1}; EC=2.1.1.107 {ECO:0000313|EMBL:CBK42449.1};; EC=4.2.1.75 {ECO:0000313|EMBL:CBK42449.1};; TaxID=330214 species="Bacteria; Nitrospirae;
Porphyrin biosynthesis protein HemD n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR2_9BACT
13_1_40cm_4_scaffold_3498_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6245..6637
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_4_scaffold_3498_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6649..7623
DNA (975bp) protein (325aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGR0_9BACT
13_1_40cm_4_scaffold_3498_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7796..9958
DNA (2163bp) protein (721aa)
tilS; tRNA(Ile)-lysidine synthase (EC:6.3.4.-); K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
tilS; tRNA(Ile)-lysidine synthase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGQ8_9BACT
13_1_40cm_4_scaffold_3498_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9965..10513
DNA (549bp) protein (183aa)
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGQ7_9BACT
13_1_40cm_4_scaffold_3498_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10610..12424
DNA (1815bp) protein (605aa)
hflB; cell division protease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CBK42443.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nit
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGQ6_9BACT
13_1_40cm_4_scaffold_3498_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

12597..13481
DNA (885bp) protein (295aa)
folP; dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGQ5_9BACT
13_1_40cm_4_scaffold_3498_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13506..14855
DNA (1350bp) protein (450aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGQ4_9BACT
13_1_40cm_4_scaffold_3498_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14886..17171
DNA (2286bp) protein (762aa)
Putative Competence protein ComEC/Rec2 related protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGQ3_9BACT
putative competence protein ComEC/Rec2 related protein
Putative Competence protein ComEC/Rec2 related protein {ECO:0000313|EMBL:CBK42440.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitro
Displaying 15 items

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