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13_1_40cm_4_scaffold_26274

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_26274_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1..528
DNA (528bp) protein (176aa)
phoR; phosphate regulon sensor protein PhoR; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curate
Phosphate regulon sensor protein PhoR n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAZ6_GEMAT
ATP-binding region ATPase domain protein
13_1_40cm_4_scaffold_26274_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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607..1695
DNA (1089bp) protein (363aa)
Putative uncharacterized protein id=2230495 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_26274_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1714..2745
DNA (1032bp) protein (344aa)
phosphate ABC transporter substrate-binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphate ABC transporter, periplasmic phosphate-binding protein id=3880880 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter periplasmic phosphate binding protein
13_1_40cm_4_scaffold_26274_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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2848..3408
DNA (561bp) protein (187aa)
Phosphate ABC transporter, inner membrane subunit PstC n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WYS1_ACISM
phosphate ABC transporter permease; K02037 phosphate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
phosphate ABC transporter permease
13_1_40cm_4_scaffold_26274_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3357..3836
DNA (480bp) protein (160aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMC5_KORVE
phosphate ABC transporter, inner membrane subunit PstC Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphate ABC transporter permease
13_1_40cm_4_scaffold_26274_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3875..4681
DNA (807bp) protein (269aa)
Phosphate transport system permease protein PstA n=1 Tax=uncultured bacterium F25-01 RepID=I3VIG0_9BACT
phosphate ABC transporter permease; K02038 phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phosphate ABC transporter membrane protein
13_1_40cm_4_scaffold_26274_7
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4665..5441
DNA (777bp) protein (259aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9J2_GEOBB
pstB-1; phosphate ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_26274_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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5447..6202
DNA (756bp) protein (252aa)
phosphate transporter ATP-binding protein; K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=GWC2_Gemmatimonadetes_71_10_curated
phosphate ABC transporter ATP-binding protein n=1 Tax=Desulfurispora thermophila RepID=UPI000370AC02
phosphate transporter ATP-binding protein
13_1_40cm_4_scaffold_26274_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6199..6903
DNA (705bp) protein (235aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB06_GEMAT
phoU; phosphate transport system regulatory protein PhoU; K02039 phosphate transport system protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
phoU; phosphate transport system regulatory protein PhoU
13_1_40cm_4_scaffold_26274_10
RIFOXYA1_FULL_Bacteriovorax_36_14_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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6945..7286
DNA (342bp) protein (114aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JF76_ANAD2
methylase involved in ubiquinone/menaquinone biosynthesis Tax=RIFOXYA1_FULL_Bacteriovorax_36_14_curated
protein-tyrosine phosphatase
13_1_40cm_4_scaffold_26274_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(7268..8032)
DNA (765bp) protein (255aa)
Rhomboid family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAN7_ANADF
rhomboid family protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
rhomboid family protein
13_1_40cm_4_scaffold_26274_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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8175..10154
DNA (1980bp) protein (660aa)
Chaperone protein DnaK n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB12_GEMAT
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK Tax=RBG_16_Gemmatimonadetes_66_8_curated
Chaperone protein dnaK
13_1_40cm_4_scaffold_26274_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10167..11729
DNA (1563bp) protein (521aa)
Putative S1 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB13_GEMAT
putative S1 family peptidase Tax=RBG_16_Gemmatimonadetes_66_8_curated
PDZ/DHR/GLGF domain protein
13_1_40cm_4_scaffold_26274_14
unknown

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comp(11789..12454)
DNA (666bp) protein (222aa)

This feature has no annotations

13_1_40cm_4_scaffold_26274_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12529..13032
DNA (504bp) protein (168aa)
hypothetical protein
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
alias=16ft_combo_ws3_scaffold_11273_12 id=14625152 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_26274_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(13069..13911)
DNA (843bp) protein (281aa)
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AHG89948.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative CtaG protein id=4743809 bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_26274_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(13908..14165)
DNA (258bp) protein (86aa)
hypothetical protein id=24489208 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
Displaying 17 items

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