ggKbase home page

13_1_40cm_4_scaffold_2679

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2679_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..531)
DNA (531bp) protein (177aa)
integral membrane transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative integral membrane transport protein id=4722254 bin=GWC2_Deltaproteobacteria_66_88 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_2679_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(521..1228)
DNA (708bp) protein (236aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G391_SORC5 id=5224877 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter ATPase Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC transporter ATPase
13_1_40cm_4_scaffold_2679_3
unknown

Not on your lists

comp(1393..1776)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_4_scaffold_2679_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1779..3416)
DNA (1638bp) protein (546aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AHG89637.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2679_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3379..4590)
DNA (1212bp) protein (404aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F8_GEMAT
multidrug resistance protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
multidrug resistance protein
13_1_40cm_4_scaffold_2679_6
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4587..6218)
DNA (1632bp) protein (544aa)
ABC superfamily ATP binding cassette transporter permease n=1 Tax=Desmospora sp. 8437 RepID=F5SGB0_9BACL
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:EGK11082.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="
iron ABC transporter permease
13_1_40cm_4_scaffold_2679_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6215..6745)
DNA (531bp) protein (177aa)
iron ABC transporter ATP-binding protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000381924B
spermidine/putrescine ABC transporter ATPase
13_1_40cm_4_scaffold_2679_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6729..7184)
DNA (456bp) protein (152aa)
ABC transporter related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWT9_RUBXD
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABG04139.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrob
13_1_40cm_4_scaffold_2679_9
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7181..8263)
DNA (1083bp) protein (361aa)
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein n=1 Tax=Desmospora sp. 8437 RepID=F5SGB3_9BACL
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein {ECO:0000313|EMBL:EGK11085.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae;
extracellular solute-binding protein
13_1_40cm_4_scaffold_2679_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8289..8945)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000348677C
LmbE family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_2679_11
unknown

Not on your lists

9016..10098
DNA (1083bp) protein (361aa)

This feature has no annotations

13_1_40cm_4_scaffold_2679_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

10249..10752
DNA (504bp) protein (168aa)
Tax=RBG_16_Acidobacteria_70_10_curated
13_1_40cm_4_scaffold_2679_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10761..12098)
DNA (1338bp) protein (446aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amidohydrolase id=4817215 bin=GWC2_Ignavibacteria_56_12 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
amidohydrolase
13_1_40cm_4_scaffold_2679_14
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12159..14963)
DNA (2805bp) protein (935aa)
Peptidase M16 domain protein id=4935099 bin=GWC2_Ignavibacteria_56_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
peptidase M16 domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
peptidase M16 domain-containing protein
13_1_40cm_4_scaffold_2679_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

15080..16954
DNA (1875bp) protein (625aa)
acyl-CoA dehydrogenase; K00257 [EC:1.3.99.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Acyl-CoA dehydrogenase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO id=5225245 bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
acyl-CoA dehydrogenase domain-containing protein
13_1_40cm_4_scaffold_2679_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16958..17617)
DNA (660bp) protein (220aa)
Phosphoribosyltransferase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F4C5_VERMA
phosphoribosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_2679_17
unknown

Not on your lists

comp(17614..17703)
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 17 items

View Taxonomy