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13_1_40cm_4_scaffold_5447

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5447_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..1731
DNA (1731bp) protein (577aa)
Peptidase M16 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB52_9BACT
Peptidase M16 domain protein {ECO:0000313|EMBL:EEF62737.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Ped
peptidase M16 domain-containing protein
13_1_40cm_4_scaffold_5447_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1834..3120
DNA (1287bp) protein (429aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amidohydrolase id=4817215 bin=GWC2_Ignavibacteria_56_12 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
amidohydrolase
13_1_40cm_4_scaffold_5447_3
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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5490..6512
DNA (1023bp) protein (341aa)
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein n=1 Tax=Desmospora sp. 8437 RepID=F5SGB3_9BACL
Iron ABC superfamily ATP binding cassette transporter substrate-binding protein {ECO:0000313|EMBL:EGK11085.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae;
extracellular solute-binding protein
13_1_40cm_4_scaffold_5447_4
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6509..7480
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000381924B
spermidine/putrescine ABC transporter ATP-binding subunit; K11076 putrescine transport system ATP-binding protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
spermidine/putrescine ABC transporter ATP-binding subunit
13_1_40cm_4_scaffold_5447_5
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7477..8427
DNA (951bp) protein (317aa)
ABC superfamily ATP binding cassette transporter permease n=1 Tax=Desmospora sp. 8437 RepID=F5SGB0_9BACL
Binding-protein-dependent transporter inner membrane component {ECO:0000313|EMBL:CEG30730.1}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus s
iron ABC transporter permease
13_1_40cm_4_scaffold_5447_6
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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8424..9077
DNA (654bp) protein (218aa)
ABC superfamily ATP binding cassette transporter permease n=1 Tax=Desmospora sp. 8437 RepID=F5SGB0_9BACL
ABC superfamily ATP binding cassette transporter permease {ECO:0000313|EMBL:EGK11082.1}; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_5447_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9074..10285
DNA (1212bp) protein (404aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F8_GEMAT
multidrug resistance protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
multidrug resistance protein
13_1_40cm_4_scaffold_5447_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10305..11879
DNA (1575bp) protein (525aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AHG89637.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_5447_9
unknown

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11881..12264
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_4_scaffold_5447_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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12411..12620
DNA (210bp) protein (70aa)
ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein id=12555058 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_5447_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12614..13165
DNA (552bp) protein (184aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G391_SORC5 id=5224877 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ABC transporter ATPase Tax=RBG_16_Gemmatimonadetes_66_8_curated
multidrug ABC transporter ATPase
13_1_40cm_4_scaffold_5447_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13173..14189
DNA (1017bp) protein (339aa)
integral membrane transport protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative integral membrane transport protein id=4722254 bin=GWC2_Deltaproteobacteria_66_88 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_5447_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(14186..15919)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7I3_GEMAT
putative protein kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative protein kinase
13_1_40cm_4_scaffold_5447_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(16247..17305)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4V8_GEMAT
Predicted membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:CDM65558.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyla
Protein of unknown function DUF457, transmembrane
13_1_40cm_4_scaffold_5447_15
unknown

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comp(17414..17686)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_4_scaffold_5447_16
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

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18039..18536
DNA (498bp) protein (166aa)
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
13_1_40cm_4_scaffold_5447_17
unknown

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18627..19091
DNA (465bp) protein (155aa)

This feature has no annotations

13_1_40cm_4_scaffold_5447_18
unknown

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19088..19189
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 18 items

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