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13_1_40cm_4_scaffold_1332

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1332_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..251)
DNA (249bp) protein (83aa)
Putative uncharacterized protein id=3014934 bin=GWC2_Methylomirabilis_70_16 species=Caminibacter mediatlanticus genus=Caminibacter taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_1332_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

374..1459
DNA (1086bp) protein (362aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Patatin id=4226283 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1332_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1490..2698)
DNA (1209bp) protein (403aa)
Sugar phosphate permease n=1 Tax=Burkholderia sp. BT03 RepID=J2H0Y3_9BURK
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
major facilitator superfamily protein
13_1_40cm_4_scaffold_1332_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2708..3901)
DNA (1194bp) protein (398aa)
alpha-methylacyl-CoA racemase (EC:5.1.99.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4169030 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
alpha-methylacyl-CoA racemase
13_1_40cm_4_scaffold_1332_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3912..5282)
DNA (1371bp) protein (457aa)
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4187612 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
uncharacterized protein involved in propionate catabolism
13_1_40cm_4_scaffold_1332_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(5428..6135)
DNA (708bp) protein (236aa)
hypothetical protein; K09990 hypothetical protein id=14626945 bin=bin7_NC10_sister species=Paenibacillus mucilaginosus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein; K09990 hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_4_scaffold_1332_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6132..6632)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000366735C
Uncharacterized protein {ECO:0000313|EMBL:KFA88134.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_40cm_4_scaffold_1332_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6671..7561
DNA (891bp) protein (297aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) id=4534565 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-methylhydantoinase A/acetone carboxylase beta subunit
13_1_40cm_4_scaffold_1332_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7527..8672
DNA (1146bp) protein (382aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=4534565 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_1332_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8934..10631
DNA (1698bp) protein (566aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAQ3_VERMA
5-oxoprolinase
13_1_40cm_4_scaffold_1332_11
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

10701..10886
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003604025
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_22_curated
13_1_40cm_4_scaffold_1332_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10899..11654)
DNA (756bp) protein (252aa)
Beta-lactamase family protein id=4243565 bin=GWC2_Methylomirabilis_70_24 species=Thiomicrospira crunogena genus=Thiomicrospira taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
beta-lactamase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-lactamase-like
13_1_40cm_4_scaffold_1332_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11686..12495)
DNA (810bp) protein (270aa)
Putative ABC transporter permease protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR4_9BACT
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter permease
13_1_40cm_4_scaffold_1332_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12492..13319)
DNA (828bp) protein (276aa)
Putative ABC transporter (Permease protein) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR5_9BACT
thuF; putative sugar ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter permease
13_1_40cm_4_scaffold_1332_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13339..14559)
DNA (1221bp) protein (407aa)
Putative sugar ABC transporter, periplasmic sugar-binding protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR6_9BACT
sugar ABC transporter periplasmic sugar-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
sugar ABC transporter periplasmic sugar-binding protein
13_1_40cm_4_scaffold_1332_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14603..15766
DNA (1164bp) protein (388aa)
fadE; acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWA2_Rokubacteria_73_35_curated
Acyl-CoA dehydrogenase id=5015980 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_1332_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15921..18098
DNA (2178bp) protein (726aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_4_scaffold_1332_18
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

18095..18673
DNA (579bp) protein (193aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14624311 bin=bin5_DeltaP species=Desulfovibrio alkalitolerans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
13_1_40cm_4_scaffold_1332_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18955..19338
DNA (384bp) protein (128aa)
spo0F; stage 0 sporulation protein F (EC:2.7.3.-); K02490 two-component system, response regulator, stage 0 sporulation protein F Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sporulation initiation phosphotransferase F (Stage 0 sporulation protein F) id=3461031 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
OmpR family two-component response regulator
13_1_40cm_4_scaffold_1332_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19335..20117
DNA (783bp) protein (261aa)
Methyltransferase type 11 id=3461034 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces hygroscopicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ubiquinone/menaquinone biosynthesis methyltransferase Tax=GWA2_Rokubacteria_73_35_curated
type 11 methyltransferase
13_1_40cm_4_scaffold_1332_21
unknown

Not on your lists

20232..20588
DNA (357bp) protein (119aa)

This feature has no annotations

Displaying 21 items

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