ggKbase home page

13_1_40cm_4_scaffold_879

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_879_1
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12..602)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI00036F5290
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AAU90523.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsu
13_1_40cm_4_scaffold_879_2
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(599..1693)
DNA (1095bp) protein (365aa)
Mammalian cell entry related domain protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKZ5_SYNFM
hypothetical protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ABK18097.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobactera
13_1_40cm_4_scaffold_879_3
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1686..2462)
DNA (777bp) protein (259aa)
ABC transporter related n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKZ4_SYNFM
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABK18096.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacte
13_1_40cm_4_scaffold_879_4
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2473..3621)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKZ3_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK18095.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntro
13_1_40cm_4_scaffold_879_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3655..4980)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003770D67
pyridine nucleotide-disulfide oxidoreductase
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ACO34099.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium
13_1_40cm_4_scaffold_879_6
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4973..5752)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2J6_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ77016.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula m
4Fe-4S ferredoxin
13_1_40cm_4_scaffold_879_7

Not on your lists

comp(5749..7170)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035D3CCB
Putative cytochrome b/b6 {ECO:0000313|EMBL:CBH99869.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
cytochrome b/b6 domain protein
13_1_40cm_4_scaffold_879_8
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7167..7670)
DNA (504bp) protein (168aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NPV5_GRAMM
Rieske (2Fe-2S) iron-sulfur domain-containing protein
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:AEU37194.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella malle
13_1_40cm_4_scaffold_879_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(7667..8377)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000373F2F0
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABJ88492.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="S
13_1_40cm_4_scaffold_879_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(8374..9213)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035D9A5F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88491.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_4_scaffold_879_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9210..10115)
DNA (906bp) protein (302aa)
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-) Tax=GWA2_Rokubacteria_73_35_curated
ctaB; protoheme IX farnesyltransferase (Heme O synthase) (Heme B farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase id=4083674 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_879_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(10112..10669)
DNA (558bp) protein (186aa)
Cytochrome c oxidase, subunit III n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PD0_SOLUE
cytochrome c oxidase subunit III
Cytochrome c oxidase, subunit III {ECO:0000313|EMBL:ABJ88490.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
13_1_40cm_4_scaffold_879_13
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10662..12356)
DNA (1695bp) protein (565aa)
coxA; cytochrome c oxidase subunit 1 (EC:1.9.3.1)
Cytochrome c oxidase, subunit 1 {ECO:0000313|EMBL:ACO33715.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ACO33715.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacte
Cytochrome c oxidase, subunit 1 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1D0_ACIC5
13_1_40cm_4_scaffold_879_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(12361..12933)
DNA (573bp) protein (191aa)
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU004024}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU004024};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibactera
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003775DF5
cytochrome c oxidase subunit II
13_1_40cm_4_scaffold_879_15
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(12891..13271)
DNA (381bp) protein (127aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1;; Flags: Precursor;; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (stra
Cytochrome c oxidase subunit 2 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NPV0_GRAMM
cytochrome c oxidase subunit II
13_1_40cm_4_scaffold_879_16
unknown

Not on your lists

comp(13736..14185)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_4_scaffold_879_17
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14214..15632)
DNA (1419bp) protein (473aa)
Cytochrome c Hsc n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7T7F7_9DELT
Cytochrome c Hsc {ECO:0000313|EMBL:EPR33047.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio al
cytochrome c
13_1_40cm_4_scaffold_879_18
unknown

Not on your lists

15836..16087
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_879_19
unknown

Not on your lists

16366..16587
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_4_scaffold_879_20
unknown

Not on your lists

16717..17106
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_4_scaffold_879_21
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17147..17587)
DNA (441bp) protein (147aa)
hypothetical protein Tax=CSP1_8_Deltaproteobacteria
hypothetical protein id=14623054 bin=bin5_DeltaP species=uncultured Desulfofustis sp. PB-SRB1 genus=Desulfofustis taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_4_scaffold_879_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

17938..18327
DNA (390bp) protein (130aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_4_scaffold_879_23
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18429..18761)
DNA (333bp) protein (111aa)
Endoribonuclease l-psp n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9W0I8_9CYAN
Endoribonuclease l-psp {ECO:0000313|EMBL:ESA38375.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
endoribonuclease L-PSP
13_1_40cm_4_scaffold_879_24
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18773..19015)
DNA (243bp) protein (81aa)
Histidine/lysine/arginine/ornithine transporter subunit ATP-binding component of ABC superfamily n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SU38_9BRAD
Glutamate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC54156.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" sou
histidine/lysine/arginine/ornithine transporter subunit
Displaying 24 items

View Taxonomy