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13_1_40cm_4_scaffold_711_15

Organism: 13_1_40CM_4_Rokubacteria_67_11

partial RP 23 / 55 MC: 7 BSCG 23 / 51 MC: 2 ASCG 10 / 38 MC: 2
Location: comp(16549..17478)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 303.0
  • Bit_score: 417
  • Evalue 1.90e-113
pseudouridine synthase id=4608907 bin=GWC2_Methylomirabilis_70_24 species=Sporolactobacillus inulinus genus=Sporolactobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 315.0
  • Bit_score: 363
  • Evalue 3.00e-97
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 301.0
  • Bit_score: 292
  • Evalue 1.40e-76

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 930
GTGACCTCGAGCCGGCTCACCGTGGGCCGGACGGCGGCGGGCGCGAGGCTCGATCGCTGGCTCGCCGAGTCGCTGCCCGATCTCTCGCGCTCCCGCATCCAGCACCTGATCGCCGGCCAACACGTCACCGTGAACGGCGCGGCCACCAAGGCGTCGCACCGGCTGCACGGTGGCGAGACGATCGAGATCGACGTGCCGCCGCTGCCGCCGGATGACCTCGTCCCCGAGCCGATCGCTCTCACCGTCCTCCACGAGGACGACCACGTCCTCGTGATCGACAAGCCGGCCGGCATGGTCGTGCACCCCGGGGCTGGCAACGCCACCGGGACGCTGGCCGCCGCGGCCCTGGCTCACGCGCCGGCGATCGCCGGGGTCGGCGGACCCCGGCGGCCTGGCATCGTGCACCGGCTCGACAAGGACACGTCCGGCGTTCTCGTGATGGCGAAGACGCGCGCGGCCTACGAGGGGCTCACGGCGCAACTCGTAGAGCGATCGGTCACGCGGCGCTATGTCGCGGTCGTCCATGGCAGGGTCGGCCTCACCGCCGGTGTGGTCGACGCGCCGATGGGCCGCGATCCGAGCCATCGCCAGCGCATGGCGGTGCGACCAGCCGGCAAGGGCAAGCGCGCCGTGACGCACTACCGCGTCGTCGAGCGCTTCCCTCACTTCACGTACCTGGAGCTCAGGCTCGAAACGGGACGGACTCATCAGATCAGGGTCCACATGGCATCGCTTGGCCATCCGATCGTCGGCGACCGAACGTACGGGCGCTCGCACGGCAAGCAACCGATCGCCTCCGAGGGCCTCGCGCTGCACGCGGTCACGCTGGCGTTCCTGCACCCGATTTCGCAGAAACGGTTGGAGTTTACTGCGGCATTTCCGCTACGACTGGAGCGGCTCCTGTCTCAATTGCGCACCATGATTCGGTGA
PROTEIN sequence
Length: 310
VTSSRLTVGRTAAGARLDRWLAESLPDLSRSRIQHLIAGQHVTVNGAATKASHRLHGGETIEIDVPPLPPDDLVPEPIALTVLHEDDHVLVIDKPAGMVVHPGAGNATGTLAAAALAHAPAIAGVGGPRRPGIVHRLDKDTSGVLVMAKTRAAYEGLTAQLVERSVTRRYVAVVHGRVGLTAGVVDAPMGRDPSHRQRMAVRPAGKGKRAVTHYRVVERFPHFTYLELRLETGRTHQIRVHMASLGHPIVGDRTYGRSHGKQPIASEGLALHAVTLAFLHPISQKRLEFTAAFPLRLERLLSQLRTMIR*