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13_1_40cm_4_scaffold_10608

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_10608_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..340
DNA (339bp) protein (113aa)
Isochorismatase hydrolase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TN62_MESCW
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ADV11620.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ci
13_1_40cm_4_scaffold_10608_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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354..1550
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030EEEE0
Putative aliphatic amidase expression-regulating protein {ECO:0000313|EMBL:CDX54735.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobi
aliphatic amidase expression-regulating protein
13_1_40cm_4_scaffold_10608_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1570..2328
DNA (759bp) protein (253aa)
Putative high-affinity branched-chain amino acid transport ATP-binding protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZLN2_ROSLO
Putative high-affinity branched-chain amino acid transport ATP-binding protein {ECO:0000313|EMBL:CDX43816.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobac
high-affinity branched-chain amino acid transport ATP-binding protein
13_1_40cm_4_scaffold_10608_4
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2350..3054
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E15B08
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:CDX28409.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteri
high-affinity branched-chain amino acid transport ATP-binding protein
13_1_40cm_4_scaffold_10608_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3066..3920
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000303F159
Putative high-affinity branched-chain amino acid transport system permease protein {ECO:0000313|EMBL:CDX54729.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyll
high-affinity branched-chain amino acid transport system permease
13_1_40cm_4_scaffold_10608_6
unknown

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comp(4431..4679)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_4_scaffold_10608_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5311..5739
DNA (429bp) protein (143aa)
putative dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=1773285 bin=GWD2_Deltaproteobacteria_55_8 species=Pyrobaculum oguniense genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
protocatechuate 4,5-dioxygenase subunit beta
13_1_40cm_4_scaffold_10608_8
unknown

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5736..5972
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_4_scaffold_10608_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(6023..7774)
DNA (1752bp) protein (584aa)
dipeptidyl aminopeptidase; K06978 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hydrolase CocE/NonD family protein id=4827668 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase S15
13_1_40cm_4_scaffold_10608_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7965..8621
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I8WBY9_9BACE
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
13_1_40cm_4_scaffold_10608_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(8654..9646)
DNA (993bp) protein (331aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Oxidoreductase family protein id=4827670 bin=GWA2_Methylomirabilis_73_35 species=Roseomonas cervicalis genus=Roseomonas taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_10608_12
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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9776..11263
DNA (1488bp) protein (496aa)
amidohydrolase n=1 Tax=Scytonema hofmanni RepID=UPI0003465913
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein
13_1_40cm_4_scaffold_10608_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11221..12351)
DNA (1131bp) protein (377aa)
adenylate/guanylate cyclase Tax=CSP1_5_NC10
adenylate/guanylate cyclase id=14429036 bin=bin3_NC10 species=Methyloferula stellata genus=Methyloferula taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
adenylate/guanylate cyclase
13_1_40cm_4_scaffold_10608_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(12360..12797)
DNA (438bp) protein (146aa)
desulfoferrodoxin ferrous iron-binding region; K05919 superoxide reductase [EC:1.15.1.2] id=14627204 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
sor; rubredoxin superoxide reductase (1-Fe-SOR) (EC:1.15.1.2); K05919 superoxide reductase [EC:1.15.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sor; rubredoxin superoxide reductase (1-Fe-SOR) (EC:1.15.1.2)
13_1_40cm_4_scaffold_10608_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12815..13189)
DNA (375bp) protein (125aa)
response regulator in two-component regulatory system (CheY-like protein) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
response regulator in two-component regulatory system (CheY-like protein) id=14627203 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
response regulator in two-component regulatory system (CheY-like protein)
13_1_40cm_4_scaffold_10608_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(13186..14802)
DNA (1617bp) protein (539aa)
histidine kinase (EC:2.7.13.3) id=14627202 bin=bin7_NC10_sister species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
histidine kinase (EC:2.7.13.3) Tax=CSP1_6_Rokubacteria
histidine kinase (EC:2.7.13.3)
13_1_40cm_4_scaffold_10608_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14821..15525)
DNA (705bp) protein (235aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627205 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_10608_18
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

16959..18395
DNA (1437bp) protein (479aa)
Uncharacterized protein Tax=RBG_16_RIF_CHLX_72_14_curated
13_1_40cm_4_scaffold_10608_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(18660..19322)
DNA (663bp) protein (221aa)
Lytic transglycosylase, catalytic id=4686850 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Lytic transglycosylase, catalytic Tax=GWA2_Rokubacteria_70_23_curated
lytic transglycosylase, catalytic
13_1_40cm_4_scaffold_10608_20
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19788..20639)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO35354.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp.
Prolin-rich exported protein id=4224088 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
OmpA/MotB domain-containing protein
Displaying 20 items

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