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13_1_40cm_4_scaffold_25316

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_25316_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1..240)
DNA (240bp) protein (80aa)
General secretory pathway protein E id=1924178 bin=GWA2_Methylomirabilis_73_35 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tapB; type IV pilus assembly protein tapB Tax=GWA2_Rokubacteria_73_35_curated
general secretory pathway protein E; K02652 type IV pilus assembly protein PilB
13_1_40cm_4_scaffold_25316_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

403..1593
DNA (1191bp) protein (397aa)
Formyl-CoA transferase (EC:2.8.3.16) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative CoA-transferase (EC:2.8.3.-)
Formyl-CoA transferase id=1924176 bin=GWA2_Methylomirabilis_73_35 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_25316_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1839..2633
DNA (795bp) protein (265aa)
Enoyl CoA hydratase id=1924174 bin=GWA2_Methylomirabilis_73_35 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fadB; enoyl CoA hydratase Tax=GWA2_Rokubacteria_73_35_curated
fadB; enoyl CoA hydratase
13_1_40cm_4_scaffold_25316_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2645..3811
DNA (1167bp) protein (389aa)
mmgC1; acyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase id=1924172 bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
mmgC1; acyl-CoA dehydrogenase
13_1_40cm_4_scaffold_25316_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4097..5131
DNA (1035bp) protein (345aa)
mvaB; hydroxymethylglutaryl-CoA lyase (EC:4.1.3.4); K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] Tax=GWA2_Rokubacteria_73_35_curated
Putative hydroxymethylglutaryl-CoA lyase id=3674961 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HMGL-like family protein
13_1_40cm_4_scaffold_25316_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5149..5688
DNA (540bp) protein (180aa)
O-methyltransferase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative O-methyltransferase id=1924162 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative O-methyltransferase
13_1_40cm_4_scaffold_25316_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(5685..6833)
DNA (1149bp) protein (383aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] id=14632303 bin=bin9_gal15 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=CSP1_3_Armatimonadetes
citrate synthase (EC:2.3.3.1)
13_1_40cm_4_scaffold_25316_8
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

6964..7239
DNA (276bp) protein (92aa)
DNA binding domain, excisionase family protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYI9_THERP
excisionase family DNA binding protein
DNA binding domain, excisionase family protein {ECO:0000313|EMBL:ACM04526.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicro
13_1_40cm_4_scaffold_25316_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7424..8200
DNA (777bp) protein (259aa)
luciferase family protein Tax=GWA2_Rokubacteria_73_35_curated
Luciferase family protein id=1924160 bin=GWA2_Methylomirabilis_73_35 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase family protein
13_1_40cm_4_scaffold_25316_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8345..9031
DNA (687bp) protein (229aa)
Lipolytic enzyme, G-D-S-L id=1924158 bin=GWA2_Methylomirabilis_73_35 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lipolytic protein Tax=GWA2_Rokubacteria_73_35_curated
adventurous gliding motility protein C
13_1_40cm_4_scaffold_25316_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9080..9574
DNA (495bp) protein (165aa)
id=4412553 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4412553 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_4_scaffold_25316_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9649..10566
DNA (918bp) protein (306aa)
Binding-protein-dependent transport systems inner membrane component id=1924020 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_25316_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10765..11343
DNA (579bp) protein (193aa)
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
Binding-protein-dependent transport systems inner membrane component id=1924018 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
13_1_40cm_4_scaffold_25316_14
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11353..11934
DNA (582bp) protein (194aa)
metal dependent phosphohydrolase; K08722 5'-nucleotidase [EC:3.1.3.5] Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
Metal dependent phosphohydrolase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NJA6_9FIRM
5'-nucleotidase
13_1_40cm_4_scaffold_25316_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11983..13509
DNA (1527bp) protein (509aa)
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Extracellular solute-binding protein family 5 id=1924016 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 5 extracellular solute-binding protein
13_1_40cm_4_scaffold_25316_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13506..14675
DNA (1170bp) protein (390aa)
Amidohydrolase n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F1Z5_VERMA
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
amidohydrolase
Displaying 16 items

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