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13_1_40cm_4_scaffold_2863

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2863_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..563)
DNA (561bp) protein (187aa)
6-phosphofructokinase (EC:2.7.1.11) Tax=GWA2_Rokubacteria_73_35_curated
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase id=4379939 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2863_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(560..1123)
DNA (564bp) protein (188aa)
Phosphohistidine phosphatase SixA n=1 Tax=Thauera sp. 63 RepID=N6XBF4_9RHOO
putative phosphohistidine phosphatase SixA Tax=GWA2_Rokubacteria_73_35_curated
phosphohistidine phosphatase SixA
13_1_40cm_4_scaffold_2863_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1179..2420)
DNA (1242bp) protein (414aa)
crotonyl-CoA reductase; K14446 crotonyl-CoA carboxylase/reductase [EC:1.3.1.85] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Crotonyl-CoA reductase id=3646800 bin=GWC2_Methylomirabilis_70_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
crotonyl-CoA reductase
13_1_40cm_4_scaffold_2863_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2413..3444)
DNA (1032bp) protein (344aa)
luciferase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Luciferase family protein id=3646803 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
luciferase family protein
13_1_40cm_4_scaffold_2863_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3553..3990)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627394 bin=bin7_NC10_sister species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_2863_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(4001..4474)
DNA (474bp) protein (158aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14627393 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_2863_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4542..5003
DNA (462bp) protein (154aa)
Transcriptional regulator, HxlR family n=3 Tax=Geobacillus RepID=E3IGU0_GEOS0
HxlR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
HxlR family transcriptional regulator
13_1_40cm_4_scaffold_2863_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5017..6132)
DNA (1116bp) protein (372aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-nitropropane dioxygenase NPD n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D0Y5_PAESJ
2-nitropropane dioxygenase NPD
13_1_40cm_4_scaffold_2863_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6135..7031)
DNA (897bp) protein (299aa)
id=3202777 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3202777 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_2863_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7015..8199)
DNA (1185bp) protein (395aa)
coA-transferase III family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
L-carnitine dehydratase/bile acid-inducible protein F id=3227645 bin=GWC2_Methylomirabilis_70_24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
coA-transferase III family protein
13_1_40cm_4_scaffold_2863_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8196..8342)
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_4_scaffold_2863_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8458..8883)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A31576
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GlcG protein
13_1_40cm_4_scaffold_2863_13
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(8886..9194)
DNA (309bp) protein (103aa)
Assimilatory nitrite reductase (NAD(P)H) small subunit {ECO:0000313|EMBL:ABQ91575.1}; EC=1.7.1.4 {ECO:0000313|EMBL:ABQ91575.1};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexal
Assimilatory nitrite reductase (NAD(P)H) small subunit n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UY72_ROSS1
Rieske (2Fe-2S) domain-containing protein
13_1_40cm_4_scaffold_2863_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(9241..9924)
DNA (684bp) protein (228aa)
aldehyde dehydrogenase n=1 Tax=Alicyclobacillus pohliae RepID=UPI000362186C
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_4_scaffold_2863_15
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10042..10770)
DNA (729bp) protein (243aa)
Transcriptional regulator, GntR family n=1 Tax=Thermincola potens (strain JR) RepID=D5X921_THEPJ
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADG81021.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (
13_1_40cm_4_scaffold_2863_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

10784..11824
DNA (1041bp) protein (347aa)
gentisate 1,2-dioxygenase (EC:1.13.11.4); K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Gentisate 1,2-dioxygenase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S8P6_9BURK
gentisate 1,2-dioxygenase
13_1_40cm_4_scaffold_2863_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11852..12895)
DNA (1044bp) protein (348aa)
GAF/GGDEF domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Diguanylate cyclase with GAF sensor id=4699803 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor-containing diguanylate cyclase
13_1_40cm_4_scaffold_2863_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12904..13911)
DNA (1008bp) protein (336aa)
GAF/GGDEF domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Diguanylate cyclase with GAF sensor id=4699803 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor-containing diguanylate cyclase
13_1_40cm_4_scaffold_2863_19
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13992..15062)
DNA (1071bp) protein (357aa)
GAF sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
GAF/GGDEF domain-containing protein id=4699804 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GAF sensor-containing diguanylate cyclase
13_1_40cm_4_scaffold_2863_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15424..16848
DNA (1425bp) protein (475aa)
Predicted protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Predicted protein id=4699805 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Micromonas taxon_order=Mamiellales taxon_class=Mamiellophyceae phylum=Chlorophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 20 items

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