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13_1_40cm_4_scaffold_3003

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3003_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1..300)
DNA (300bp) protein (100aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Carboxymethylenebutenolidase (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme id=1724740 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_3003_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(303..1544)
DNA (1242bp) protein (414aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3775497 bin=GWF2_Methylomirabilis_70_14 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_3003_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1547..2824)
DNA (1278bp) protein (426aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3234906 bin=GWC2_Methylomirabilis_70_16 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_3003_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2821..3837)
DNA (1017bp) protein (339aa)
thiamine-monophosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Thiamine-monophosphate kinase id=1724736 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiL; thiamin monophosphate kinase
13_1_40cm_4_scaffold_3003_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3834..4406)
DNA (573bp) protein (191aa)
trpG; anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glutamine amidotransferase of anthranilate synthase id=3775487 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamine amidotransferase
13_1_40cm_4_scaffold_3003_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4403..5857)
DNA (1455bp) protein (485aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] id=14625549 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
trpE; anthranilate synthase, component I (EC:4.1.3.27)
13_1_40cm_4_scaffold_3003_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5960..6289)
DNA (330bp) protein (110aa)
Thioredoxin id=4814769 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
trxA; thioredoxin 1, redox factor Tax=GWC2_Rokubacteria_70_16_curated
trxA; thioredoxin 1, redox factor
13_1_40cm_4_scaffold_3003_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6417..7766
DNA (1350bp) protein (450aa)
acetoacetate metabolism regulatory protein AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Two component, sigma54 specific, transcriptional regulator, Fis family id=4814770 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
zraR; transcriptional regulatory protein ZraR
13_1_40cm_4_scaffold_3003_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7887..8825
DNA (939bp) protein (313aa)
id=4814771 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=4814771 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_3003_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8929..10530)
DNA (1602bp) protein (534aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] id=14625563 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
13_1_40cm_4_scaffold_3003_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10691..12907)
DNA (2217bp) protein (739aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=4771369 bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_3003_12
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12917..13135)
DNA (219bp) protein (73aa)
Methyltransferase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0EXI8_CUPNN
h16_A0727; methyltransferase
Methyltransferase {ECO:0000313|EMBL:AEI76093.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (str
13_1_40cm_4_scaffold_3003_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13604..14599)
DNA (996bp) protein (332aa)
putative methyl transferase Tax=GWA2_Rokubacteria_70_23_curated
Methylase involved in ubiquinone/menaquinone biosynthesis id=4814775 bin=GWC2_Methylomirabilis_70_16 species=Bradyrhizobium sp. YR681 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative methyl transferase
13_1_40cm_4_scaffold_3003_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14596..16485)
DNA (1890bp) protein (630aa)
Asparagine synthetase id=4814774 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase Tax=GWC2_Rokubacteria_70_16_curated
asparagine synthase
13_1_40cm_4_scaffold_3003_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(16491..17459)
DNA (969bp) protein (323aa)
Glycosyl transferase id=4814773 bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycosyltransferase Tax=GWC2_Rokubacteria_70_16_curated
undecaprenyl-phosphate glycosyltransferase, DPM1-like family
13_1_40cm_4_scaffold_3003_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(17456..19027)
DNA (1572bp) protein (524aa)
Putative uncharacterized protein id=4814777 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
glycosyl transferase family protein 5
13_1_40cm_4_scaffold_3003_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19201..20373)
DNA (1173bp) protein (391aa)
FAD dependent oxidoreductase id=4614152 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase Tax=GWC2_Rokubacteria_70_16_curated
FAD dependent oxidoreductase
Displaying 17 items

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