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13_1_40cm_4_scaffold_41354

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_41354_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..668)
DNA (666bp) protein (222aa)
NCAIR mutase-like protein; K06898 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase id=4947257 bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NCAIR mutase-like protein
13_1_40cm_4_scaffold_41354_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(661..1494)
DNA (834bp) protein (278aa)
hypothetical protein; K06864 uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
PP-loop domain-containing protein; K06864 uncharacterized protein id=14625899 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ExsB family protein
13_1_40cm_4_scaffold_41354_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1491..2402)
DNA (912bp) protein (304aa)
carbohydrate kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PfkB id=4947255 bin=GWA2_Methylomirabilis_73_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar kinase
13_1_40cm_4_scaffold_41354_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2395..3336)
DNA (942bp) protein (314aa)
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=GWA2_Rokubacteria_73_35_curated
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=14625897 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
putative s-methyl-5'-thioadenosine phosphorylase (EC:2.4.2.28)
13_1_40cm_4_scaffold_41354_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3396..4697)
DNA (1302bp) protein (434aa)
MiaB-like tRNA modifying enzyme Tax=GWA2_Rokubacteria_73_35_curated
tRNA (2-methylthio-N6-threonylcarbamyl-A37) methylthiotransferase id=4947253 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tRNA methyltransferase
13_1_40cm_4_scaffold_41354_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4694..5362)
DNA (669bp) protein (223aa)
pyruvate formate lyase activating enzyme 2 (yfgB) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Probable dual-specificity RNA methyltransferase RlmN id=3130417 bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
radical SAM domain-containing protein
13_1_40cm_4_scaffold_41354_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5433..5759)
DNA (327bp) protein (109aa)
radical SAM enzyme, Cfr family; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=GWA2_Rokubacteria_73_35_curated
tRNA (2-methylthio-N6-threonylcarbamyl-A37) methylthiotransferase id=4947253 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S rRNA methyltransferase
Displaying 7 items

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