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13_1_40cm_4_scaffold_6495

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6495_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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528..1160
DNA (633bp) protein (211aa)
haloalkane dehalogenase; K01563 haloalkane dehalogenase [EC:3.8.1.5] Tax=GWA2_Rokubacteria_73_35_curated
Alpha/beta hydrolase fold protein id=1746149 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
haloalkane dehalogenase
13_1_40cm_4_scaffold_6495_2
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1118..1297
DNA (180bp) protein (60aa)
Haloalkane dehalogenase {ECO:0000256|HAMAP-Rule:MF_01231}; EC=3.8.1.5 {ECO:0000256|HAMAP-Rule:MF_01231};; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzner
haloalkane dehalogenase LinB (EC:3.8.1.5)
Alpha/beta hydrolase fold protein id=1746149 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6495_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1344..2480
DNA (1137bp) protein (379aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A0M5_STAND
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADH91346.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="
13_1_40cm_4_scaffold_6495_4
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2477..3523
DNA (1047bp) protein (349aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; My
Sensor protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZZ8_CORCM
divL; sensor protein
13_1_40cm_4_scaffold_6495_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3498..4133)
DNA (636bp) protein (212aa)
OmpA/MotB domain protein id=1746151 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
OmpA/MotB domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
OmpA/MotB family outer membrane protein
13_1_40cm_4_scaffold_6495_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4288..4773)
DNA (486bp) protein (162aa)
Uncharacterized protein id=1746153 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_6495_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4789..5451)
DNA (663bp) protein (221aa)
TENA/THI-4 family; K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TENA/THI-4 family id=1746155 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TenA family transcription regulator
13_1_40cm_4_scaffold_6495_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5465..6259)
DNA (795bp) protein (265aa)
paaG; enoyl-CoA hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Enoyl-CoA hydratase id=1746157 bin=GWA2_Methylomirabilis_73_35 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
paaG; enoyl-CoA hydratase
13_1_40cm_4_scaffold_6495_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6345..6680
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037792A1
Uncharacterized protein {ECO:0000313|EMBL:ETX07916.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_4_scaffold_6495_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6715..9474)
DNA (2760bp) protein (920aa)
spermine/spermidine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWC2_Rokubacteria_70_16_curated
Spermine/spermidine synthase family protein id=3979144 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
spermine synthase
13_1_40cm_4_scaffold_6495_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9508..9678)
DNA (171bp) protein (57aa)
id=4614271 Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

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