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13_1_40cm_4_scaffold_57495_1

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(1..489)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LND9_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 140.0
  • Bit_score: 78
  • Evalue 6.00e-12
PAS modulated Fis family sigma-54 specific transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 39.7
  • Coverage: 146.0
  • Bit_score: 86
  • Evalue 3.10e-14
two component sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 140.0
  • Bit_score: 78
  • Evalue 1.70e-12

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGGCCCTCTATTTGCCTGCCGGAAATCTGCTGAGCCATCGAGACGTGACGAAACGGCTGCTGATCGTCGTCGACGACCAGGGAATGGTCGCCCTGCTGCGGGAGTTCTTTTGCTACTTCACCCGGCAGCGGGTCGAGCACGAGCGCAAGTTCGAGGTCATCTCGGCCTATGATGTTGTCGACGCGCTCGCCATCCTACGGCGCGAAAAGTTCGATCTCATTCTTCTGGGTGTTCAAATGCCACTGAGGGCAATCGTGGAGCAAGGGCGCATGTTCAAGTACGGGTTAGCCGATAACGGCCTCGGTCTGCTAAAGGCGATTCGCAGGCTCGGTGTGAATACGCCGGTCATTATGATCAGCGACTTCAATGATATCGAGAAGACGGCCGAGGCCCTGACGGAAGGAGCGTTTGCCTACGTCGCCCATCCTTTCGACCTGCCCGAACTGGATAAACTGGTCGCTCTCGCCCTCGACGAGTCCGGCCCTCAC
PROTEIN sequence
Length: 163
MALYLPAGNLLSHRDVTKRLLIVVDDQGMVALLREFFCYFTRQRVEHERKFEVISAYDVVDALAILRREKFDLILLGVQMPLRAIVEQGRMFKYGLADNGLGLLKAIRRLGVNTPVIMISDFNDIEKTAEALTEGAFAYVAHPFDLPELDKLVALALDESGPH