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13_1_40cm_4_scaffold_57495

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_57495_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1..489)
DNA (489bp) protein (163aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LND9_SYNFM
PAS modulated Fis family sigma-54 specific transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
two component sigma54 specific Fis family transcriptional regulator
13_1_40cm_4_scaffold_57495_2
unknown

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574..720
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_4_scaffold_57495_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1003..2736)
DNA (1734bp) protein (578aa)
dihydroxyacid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=3261970 bin=GWA2_Methylomirabilis_73_35 species=uncultured bacterium CSLF43 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_57495_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2987..3307
DNA (321bp) protein (107aa)
GYD domain superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GYD domain superfamily id=14626792 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
GYD domain superfamily
13_1_40cm_4_scaffold_57495_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3310..3795
DNA (486bp) protein (162aa)
Fe-S-cluster-containing hydrogenase components 2 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
iron-sulfur cluster-binding protein; potential subunit of aldehyde oxidoreductase id=14626791 bin=bin7_NC10_sister species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
(Fe-S)-binding protein
13_1_40cm_4_scaffold_57495_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4009..4803
DNA (795bp) protein (265aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=14626790 bin=bin7_NC10_sister species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_40cm_4_scaffold_57495_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4875..5285
DNA (411bp) protein (137aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=4117240 bin=GWC2_Methylomirabilis_70_24 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_57495_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5282..7222
DNA (1941bp) protein (647aa)
aldehyde:ferredoxin oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde:ferredoxin oxidoreductase id=14626789 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
aldehyde:ferredoxin oxidoreductase
13_1_40cm_4_scaffold_57495_9
unknown

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comp(8565..8633)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 9 items

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