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13_1_40cm_4_scaffold_19259

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_19259_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..295
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
von Willebrand factor type A
13_1_40cm_4_scaffold_19259_2
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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285..2822
DNA (2538bp) protein (846aa)
hypothetical protein id=24486796 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
hypothetical protein
13_1_40cm_4_scaffold_19259_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2898..6512
DNA (3615bp) protein (1205aa)
2-oxoglutarate dehydrogenase, E1 subunit; K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
2-oxoglutarate dehydrogenase, E1 subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK1_CONWI
2-oxoglutarate dehydrogenase, E1 subunit
13_1_40cm_4_scaffold_19259_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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6746..7423
DNA (678bp) protein (226aa)
Kelch repeat-containing protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHL5_9BACT
Kelch repeat-containing protein
Kelch repeat-containing protein {ECO:0000313|EMBL:CBE67148.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_4_scaffold_19259_5
unknown

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comp(7354..7773)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_4_scaffold_19259_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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7831..8304
DNA (474bp) protein (158aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Phosphatidylethanolamine-binding protein id=3525927 bin=GWA2_Elusimicrobia_66_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
PEBP family protein
13_1_40cm_4_scaffold_19259_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8332..8904
DNA (573bp) protein (191aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5S9_GEMAT
hypothetical membrane protein; K02221 YggT family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical membrane protein
13_1_40cm_4_scaffold_19259_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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8933..9085
DNA (153bp) protein (51aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_19259_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9094..9927)
DNA (834bp) protein (278aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQM0_9BACT id=5225690 bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_19259_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(10040..10639)
DNA (600bp) protein (200aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_19259_11
unknown

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comp(10626..10991)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_19259_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(10988..11236)
DNA (249bp) protein (83aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LG68_FRASN
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=GWC2_Gemmatimonadetes_71_10_curated
ECF subfamily RNA polymerase sigma-24 factor
Displaying 12 items

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