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13_1_40cm_4_scaffold_318

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Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_318_1
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..673
DNA (672bp) protein (224aa)
glycosyl transferase family protein; K02843 heptosyltransferase II [EC:2.4.-.-] Tax=RBG_13_Deltaproteobacteria_61_14_curated
Putative heptosyltransferase id=5017195 bin=GWA2_Ignavibacteria_55_11 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
glycosyl transferase family protein
13_1_40cm_4_scaffold_318_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

670..1047
DNA (378bp) protein (126aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_318_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1050..1928
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A618_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_318_4
unknown

Not on your lists

comp(1939..2349)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_318_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2443..3186
DNA (744bp) protein (248aa)
Probable transcriptional regulatory protein GAU_0635 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=Y635_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0082 protein yeeN
13_1_40cm_4_scaffold_318_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3183..3659
DNA (477bp) protein (159aa)
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ruvC; Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A616_GEMAT
13_1_40cm_4_scaffold_318_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3656..4261
DNA (606bp) protein (202aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036780A7
Holliday junction ATP-dependent DNA helicase ruvA
13_1_40cm_4_scaffold_318_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4264..4434
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_318_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

4438..5469
DNA (1032bp) protein (344aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RUVB_GEMAT
ruvB; Holliday junction DNA helicase RuvB
13_1_40cm_4_scaffold_318_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5559..6605
DNA (1047bp) protein (349aa)
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A610_GEMAT
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
13_1_40cm_4_scaffold_318_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6647..7870
DNA (1224bp) protein (408aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Queuine tRNA-ribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A609_GEMAT
Queuine tRNA-ribosyltransferase
13_1_40cm_4_scaffold_318_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7867..8199
DNA (333bp) protein (111aa)
yajC; preprotein translocase YajC subunit; K03210 preprotein translocase subunit YajC Tax=RBG_16_Gemmatimonadetes_66_8_curated
yajC; preprotein translocase YajC subunit
Preprotein translocase subunit YajC id=5009364 bin=GWA2_Ignavibacteriae_55_25 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
13_1_40cm_4_scaffold_318_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8196..8744
DNA (549bp) protein (183aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_16_Gemmatimonadetes_66_8_curated
def; peptide deformylase Def (EC:3.5.1.88)
peptide deformylase n=1 Tax=Rhizobium giardinii RepID=UPI00036085A2
13_1_40cm_4_scaffold_318_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

8744..9667
DNA (924bp) protein (308aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Methionyl-tRNA formyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A606_GEMAT
Methionyl-tRNA formyltransferase
13_1_40cm_4_scaffold_318_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9667..10281
DNA (615bp) protein (205aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIG4_ANASK
13_1_40cm_4_scaffold_318_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10278..10487
DNA (210bp) protein (70aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0ILJ1_9SPHN
thiamine biosynthesis protein ThiS Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_318_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10492..11289
DNA (798bp) protein (266aa)
thiG; thiazole biosynthesis protein thiG Tax=RBG_16_Gemmatimonadetes_66_8_curated
Thiazole synthase id=3894134 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
thiG; thiazole biosynthesis protein thiG
13_1_40cm_4_scaffold_318_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11432..12577
DNA (1146bp) protein (382aa)
putative rRNA methyltransferase (EC:2.1.1.-); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative rRNA methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A605_GEMAT
sun protein
13_1_40cm_4_scaffold_318_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12577..13347
DNA (771bp) protein (257aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Serine/threonine protein kinase n=2 Tax=Thermobifida fusca RepID=Q47KC3_THEFY
serine/threonine protein kinase
13_1_40cm_4_scaffold_318_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13344..14015
DNA (672bp) protein (224aa)
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Ribulose-phosphate 3-epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A603_GEMAT
ribulose-phosphate 3-epimerase
13_1_40cm_4_scaffold_318_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14012..14548
DNA (537bp) protein (179aa)
Thiol-disulfide oxidoreductase ResA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A602_GEMAT
resA; thiol-disulfide oxidoreductase ResA Tax=GWC2_Gemmatimonadetes_71_10_curated
resA; thiol-disulfide oxidoreductase ResA
13_1_40cm_4_scaffold_318_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

14538..15410
DNA (873bp) protein (291aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_4_scaffold_318_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


15403..16482
DNA (1080bp) protein (360aa)
gcp; O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=TSAD_GEMAT
O-sialoglycoprotein endopeptidase
13_1_40cm_4_scaffold_318_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16479..17321
DNA (843bp) protein (281aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=RBG_16_Gemmatimonadetes_66_8_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A600_GEMAT
13_1_40cm_4_scaffold_318_25
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(17313..19154)
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003771BE8
Putative Iron permease FTR1, contains cytochrome c region {ECO:0000313|EMBL:CCQ91610.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source=
iron permease FTR1
13_1_40cm_4_scaffold_318_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19171..19557)
DNA (387bp) protein (129aa)
holo-acyl-carrier-protein synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Holo-[acyl-carrier-protein] synthase n=1 Tax=Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) RepID=E1QY32_OLSUV
holo-acyl-carrier-protein synthase
13_1_40cm_4_scaffold_318_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19554..21743)
DNA (2190bp) protein (730aa)
hypothetical protein n=1 Tax=Hahella ganghwensis RepID=UPI00035FB7FF
carboxypeptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
carboxypeptidase
13_1_40cm_4_scaffold_318_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(21716..22450)
DNA (735bp) protein (245aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_318_29
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22447..23040)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FEZ1_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90090.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_318_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23037..23738)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034C0CA3
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
Displaying items 1-30 of 47 in total

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