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13_1_40cm_4_scaffold_324

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_324_1
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..331
DNA (330bp) protein (110aa)
Flp pilus assembly protein id=2354775 bin=GWA2_Elusimicrobia_66_18 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
flp pilus assembly protein; K12511 tight adherence protein C Tax=GWA2_Deltaproteobacteria_65_63_curated
type II secretion system protein
13_1_40cm_4_scaffold_324_2
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

328..741
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SGN1_THEM7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU50577.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Ther
13_1_40cm_4_scaffold_324_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

814..1434
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UH40_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:KFE69117.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_40cm_4_scaffold_324_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1531..3336
DNA (1806bp) protein (602aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J5_GEMAT
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RBG_16_Gemmatimonadetes_66_8_curated
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG
13_1_40cm_4_scaffold_324_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3504..4334
DNA (831bp) protein (277aa)
Chromosome (Plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PI99_9DELT
parA; chromosome partitioning protein ParA; K03496 chromosome partitioning protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cobyrinic acid ac-diamide synthase
13_1_40cm_4_scaffold_324_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4331..5227
DNA (897bp) protein (299aa)
Chromosome partitioning protein ParB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3J2_GEMAT
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family Tax=GWC2_Gemmatimonadetes_71_10_curated
parB-like partition protein
13_1_40cm_4_scaffold_324_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5224..6012
DNA (789bp) protein (263aa)
Peptidase M23 n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A5U9_THEAQ
Cell wall endopeptidase, family M23/M37 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
metalloendopeptidase-like membrane protein
13_1_40cm_4_scaffold_324_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6014..6424
DNA (411bp) protein (137aa)
Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWY1_SOLCM
Integral membrane protein CcmA involved in cell shape determination Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Integral membrane protein CcmA involved in cell shape determination
13_1_40cm_4_scaffold_324_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

6581..7333
DNA (753bp) protein (251aa)
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVR2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NGG1p interacting factor 3 protein, NIF3
13_1_40cm_4_scaffold_324_10
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7365..7991
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13HJ8_BURXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE36441.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenov
13_1_40cm_4_scaffold_324_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8042..9316
DNA (1275bp) protein (425aa)
Major facilitator superfamily protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADQ9_GEMAT
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AHG88025.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_324_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9280..10473)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z1_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92075.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_324_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10436..11077)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA76_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92076.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_324_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11074..11628)
DNA (555bp) protein (185aa)
Putative Glycosyl hydrolase, family 13 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDN4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13 domain protein
13_1_40cm_4_scaffold_324_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11621..12178)
DNA (558bp) protein (186aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_324_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12299..13738
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T8_GEMAT
Ig domain protein group 2 domain protein
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:AHG91641.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_324_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13813..14796
DNA (984bp) protein (328aa)
Zn-dependent hydrolase
Zn-dependent hydrolase {ECO:0000313|EMBL:AHG88047.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative Zn-dependent hydrolase of beta-lactamase fold protein id=14625801 bin=bin7_NC10_sister species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_324_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14883..16355
DNA (1473bp) protein (491aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ0_KORVE
peptidase M20 Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M20
13_1_40cm_4_scaffold_324_19
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16352..17296
DNA (945bp) protein (315aa)
Putative uncharacterized protein id=4734432 bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
putative phosphohydrolase; K07098 Tax=GWC2_Deltaproteobacteria_55_46b_curated
metallophosphoesterase
13_1_40cm_4_scaffold_324_20
unknown

Not on your lists

comp(17335..17598)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_324_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17595..18575)
DNA (981bp) protein (327aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14627129 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_4_scaffold_324_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(18572..18838)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABN2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_324_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18899..20080
DNA (1182bp) protein (394aa)
class V aminotransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
class V aminotransferase id=14632116 bin=bin9_gal15 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
class V aminotransferase
13_1_40cm_4_scaffold_324_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

20037..20783
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM6_GEMAT
hypothetical protein; K06966 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_4_scaffold_324_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20788..21927
DNA (1140bp) protein (380aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] id=24490458 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
deoxyhypusine synthase-like protein
13_1_40cm_4_scaffold_324_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22118..23422
DNA (1305bp) protein (435aa)
Major facilitator family transporter n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P9Y8_9SPHN
major facilitator family transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
major facilitator family transporter
13_1_40cm_4_scaffold_324_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23445..24452
DNA (1008bp) protein (336aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
D-alanine--D-alanine ligase domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNS5_OPITP
D-alanine--D-alanine ligase
13_1_40cm_4_scaffold_324_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24445..25452
DNA (1008bp) protein (336aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_4_scaffold_324_29
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25604..26998
DNA (1395bp) protein (465aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UU23_ROSS1
PBS lyase HEAT domain-containing protein repeat-containing protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
HEAT repeat-containing PBS lyase
13_1_40cm_4_scaffold_324_30
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

27610..28818
DNA (1209bp) protein (403aa)
glycosyl hydrolase family 109 n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B62FF9
twin-arginine translocation pathway signal Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
oxidoreductase domain protein
Displaying items 1-30 of 39 in total

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