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13_1_40cm_4_scaffold_43

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Displaying items 1-30 of 102 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_43_1
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..272)
DNA (270bp) protein (90aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6N9_GEMAT
TPR repeat-containing serine/threonin protein kinase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
protein kinase
13_1_40cm_4_scaffold_43_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(321..1916)
DNA (1596bp) protein (532aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=uncultured prokaryote RepID=H5SIQ4_9ZZZZ
D-3-phosphoglycerate dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
serA; D-3-phosphoglycerate dehydrogenase
13_1_40cm_4_scaffold_43_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1913..3004)
DNA (1092bp) protein (364aa)
Transaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4S4_GEMAT
transaminase Tax=RBG_16_Gemmatimonadetes_66_8_curated
transaminase
13_1_40cm_4_scaffold_43_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3001..3666)
DNA (666bp) protein (222aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Isochorismatase hydrolase id=2010413 bin=GWB2_CP_45_9 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein
13_1_40cm_4_scaffold_43_5
unknown

Not on your lists

comp(3750..4856)
DNA (1107bp) protein (369aa)

This feature has no annotations

13_1_40cm_4_scaffold_43_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4866..5432)
DNA (567bp) protein (189aa)
N-acetyltransferase GCN5; K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
acetyltransferase (EC:2.3.1.1)
Argininosuccinate lyase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=ARLY_ROSCS id=5225765 bin=16ft_combo_ws3_JS1 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_4_scaffold_43_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5429..6604)
DNA (1176bp) protein (392aa)
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17); K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] Tax=RBG_16_Gemmatimonade
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P1_GEMAT
13_1_40cm_4_scaffold_43_8
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6601..7362)
DNA (762bp) protein (254aa)
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:00
Acetylglutamate kinase n=2 Tax=Chloroflexus RepID=ARGB_CHLAA
acetylglutamate kinase
13_1_40cm_4_scaffold_43_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7356..8315)
DNA (960bp) protein (320aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N9_GEMAT
13_1_40cm_4_scaffold_43_10
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

8330..8659
DNA (330bp) protein (110aa)
Tax=BJP_08E140C01_Anaerolineales_40_8
13_1_40cm_4_scaffold_43_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8857..10245
DNA (1389bp) protein (463aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Q9_GEMAT
TPR repeat-containing serine/threonin protein kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein kinase
13_1_40cm_4_scaffold_43_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10262..11320)
DNA (1059bp) protein (353aa)
quinolinate phosphoribosyl transferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Quinolinate phosphoribosyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
13_1_40cm_4_scaffold_43_13
unknown

Not on your lists

comp(11339..12214)
DNA (876bp) protein (292aa)

This feature has no annotations

13_1_40cm_4_scaffold_43_14
unknown

Not on your lists

comp(12192..12527)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_4_scaffold_43_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12527..13273)
DNA (747bp) protein (249aa)
Glycosyl transferase family 2 n=2 Tax=Desulfovibrio vulgaris RepID=E3ISE2_DESVR
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
glycosyl transferase group 2 family protein
13_1_40cm_4_scaffold_43_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

13450..14538
DNA (1089bp) protein (363aa)
Putative asparaginase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P9_GEMAT
putative asparaginase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative asparaginase
13_1_40cm_4_scaffold_43_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14717..15661
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039CF91F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_43_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15658..16833)
DNA (1176bp) protein (392aa)
Saccharopine dehydrogenase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N3_GEMAT
Saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHG89937.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_43_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16914..17531
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A27C1F
TetR/AcrR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
TetR family transcriptional regulator
13_1_40cm_4_scaffold_43_20
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(17611..18828)
DNA (1218bp) protein (406aa)
Metallophosphoesterase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FXP7_STIAD
membrane protein Tax=RBG_16_Nitrospirae_64_22_curated
metallophosphoesterase
13_1_40cm_4_scaffold_43_21
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18860..20155
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003773704
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46686.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
13_1_40cm_4_scaffold_43_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20236..21051)
DNA (816bp) protein (272aa)
Carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=GWC2_Gemmatimonadetes_71_10_curated
Carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] id=14623558 bin=bin5_DeltaP species=Tolumonas auensis genus=Tolumonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
carboxymethylenebutenolidase
13_1_40cm_4_scaffold_43_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21041..22126)
DNA (1086bp) protein (362aa)
L-sorbosone dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
L-sorbosone dehydrogenase id=4770555 bin=GWC2_Methylomirabilis_70_16 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
L-sorbosone dehydrogenase
13_1_40cm_4_scaffold_43_24
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22136..23230)
DNA (1095bp) protein (365aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
13_1_40cm_4_scaffold_43_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(23231..24310)
DNA (1080bp) protein (360aa)
putative serine/threonine protein kinase (EC:2.7.11.1)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEH9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_43_26
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24307..25746)
DNA (1440bp) protein (480aa)
Putative two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator; K02488 two-component system, cell cycle response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
diguanylate cyclase
13_1_40cm_4_scaffold_43_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25754..26683)
DNA (930bp) protein (310aa)
serine/threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Threonine dehydratase n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MZ34_SACVD
threonine dehydratase
13_1_40cm_4_scaffold_43_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


comp(26686..29244)
DNA (2559bp) protein (853aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
DNA gyrase subunit A n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L6_GEMAT
DNA gyrase subunit A
13_1_40cm_4_scaffold_43_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

29634..29984
DNA (351bp) protein (117aa)
transposase IS200-family protein; K07491 putative transposase Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_43_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(29999..31045)
DNA (1047bp) protein (349aa)
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Alcohol dehydrogenase zinc-binding domain protein
alcohol dehydrogenase zinc-binding domain protein id=14624585 bin=bin5_DeltaP species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin5_DeltaP organism_group=Deltaproteobacteria
Displaying items 1-30 of 102 in total

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