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13_1_40cm_4_scaffold_443

Search features with annotation key words

Displaying items 1-30 of 66 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_443_1
unknown

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_4_scaffold_443_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(179..1615)
DNA (1437bp) protein (479aa)
Putative M24 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA28_GEMAT
putative M24 family peptidase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase M24
13_1_40cm_4_scaffold_443_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1615..2220)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA29_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_443_4
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2282..2893
DNA (612bp) protein (204aa)
RNA polymerase sigma factor RpoE Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor id=4650330 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_4_scaffold_443_5
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2890..3114
DNA (225bp) protein (75aa)
Anti-sigma factor, TIGR02949 family n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MXX1_SACVD
anti-sigma factor
Anti-sigma factor, TIGR02949 family {ECO:0000313|EMBL:ACU98049.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora
13_1_40cm_4_scaffold_443_6
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

3111..3821
DNA (711bp) protein (237aa)
hypothetical protein id=14430416 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_3_Armatimonadetes
hypothetical protein
13_1_40cm_4_scaffold_443_7
unknown

Not on your lists

3812..4222
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_4_scaffold_443_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4689..5519
DNA (831bp) protein (277aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA31_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative oxidoreductase
13_1_40cm_4_scaffold_443_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5522..6004
DNA (483bp) protein (161aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA32_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
flavin reductase domain protein FMN-binding protein
13_1_40cm_4_scaffold_443_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6001..6741
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA33_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_443_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6760..7227
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA34_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Polyketide cyclase/dehydrase
13_1_40cm_4_scaffold_443_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

7224..8468
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA35_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
13_1_40cm_4_scaffold_443_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

8518..9204
DNA (687bp) protein (229aa)
MIP family channel protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBS8_9CHLR
MIP family channel protein {ECO:0000313|EMBL:EFH89860.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter ra
major intrinsic protein
13_1_40cm_4_scaffold_443_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(9209..10150)
DNA (942bp) protein (314aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="unc
delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPN3_9BACT
13_1_40cm_4_scaffold_443_15
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(10147..11073)
DNA (927bp) protein (309aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA38_GEMAT
13_1_40cm_4_scaffold_443_16
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(11070..11897)
DNA (828bp) protein (276aa)
hemD; porphyrin biosynthesis protein HemD (EC:2.1.1.107 4.2.1.75); K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrin-III C-methyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSI5_9FIRM
13_1_40cm_4_scaffold_443_17
unknown

Not on your lists

11940..12524
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_40cm_4_scaffold_443_18
unknown

Not on your lists

comp(12695..12805)
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_40cm_4_scaffold_443_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12798..13469)
DNA (672bp) protein (224aa)
Heme exporter protein C n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1F8_THERP
ccmC; heme exporter protein CcmC; K02195 heme exporter protein C Tax=RBG_16_Gemmatimonadetes_66_8_curated
cytochrome c assembly protein
13_1_40cm_4_scaffold_443_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13466..14146)
DNA (681bp) protein (227aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome c-type biogenesis protein CcmB
13_1_40cm_4_scaffold_443_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14139..14855)
DNA (717bp) protein (239aa)
Cytochrome ABC transporter ATP-binding component n=1 Tax=Adlercreutzia equolifaciens DSM 19450 RepID=S6CE22_9ACTN
heme ABC exporter, ATP-binding protein CcmA; K09687 antibiotic transport system ATP-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
cytochrome ABC transporter ATP-binding component
13_1_40cm_4_scaffold_443_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14842..15216)
DNA (375bp) protein (125aa)
two-component response regulator protein; K15012 two-component system, response regulator RegA Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative Histidine kinase id=4097828 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component sigma-54 specific Fis family transcriptional regulator
13_1_40cm_4_scaffold_443_23
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15265..15582)
DNA (318bp) protein (106aa)
anti-anti-sigma factor family protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_40cm_4_scaffold_443_24
RLO_PLX_64_10, Bacteria

Not on your lists

15851..17956
DNA (2106bp) protein (702aa)
acetate--CoA ligase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Acetyl-coenzyme A synthetase id=4380013 bin=GWA2_Methylomirabilis_73_35 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetate--CoA ligase
13_1_40cm_4_scaffold_443_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17974..19893)
DNA (1920bp) protein (640aa)
Probable potassium transport system protein kup n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SH89_9DELT
kup; potassium uptake protein; K03549 KUP system potassium uptake protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
potassium uptake protein
13_1_40cm_4_scaffold_443_26
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19906..20283)
DNA (378bp) protein (126aa)
vitamin K epoxide reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Vitamin K epoxide reductase id=4216065 bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
13_1_40cm_4_scaffold_443_27
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20283..20777)
DNA (495bp) protein (165aa)
putative oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
DsbA oxidoreductase id=88226 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
DSBA oxidoreductase
13_1_40cm_4_scaffold_443_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21395..21664
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA48_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_4_scaffold_443_29
unknown

Not on your lists

comp(21714..22172)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_4_scaffold_443_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(22186..22569)
DNA (384bp) protein (128aa)
OsmC family protein n=2 Tax=Yersinia pseudotuberculosis RepID=A7FNR4_YERP3
hypothetical protein; K07397 putative redox protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
yhfA; protein yhfA
Displaying items 1-30 of 66 in total

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