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13_1_40cm_4_scaffold_17686

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_17686_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..868
DNA (867bp) protein (289aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158) Tax=RBG_16_Betaproteobacteria_64_18_curated
D-alanine/D-alanine ligase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SJN2_GALCS
UDP-N-acetylenolpyruvoylglucosamine reductase
13_1_40cm_4_scaffold_17686_2
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

868..1788
DNA (921bp) protein (307aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RBG_16_Gamma2_64_10_curated
D-alanine--D-alanine ligase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4G9_9RHOO
dd1; D-alanine-D-alanine ligase
13_1_40cm_4_scaffold_17686_3
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1778..2515
DNA (738bp) protein (246aa)
Cell division protein FtsQ n=2 Tax=Methylovorus RepID=C6X992_METSD
cell division protein FtsQ
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Meth
13_1_40cm_4_scaffold_17686_4
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2526..3758
DNA (1233bp) protein (411aa)
cell division protein FtsA n=1 Tax=Leeia oryzae RepID=UPI000366E1EC
cell division protein FtsA Tax=CG_Beta_01
cell division protein FtsA
13_1_40cm_4_scaffold_17686_5
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3906..5078
DNA (1173bp) protein (391aa)
Cell division protein FtsZ n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK04_9PROT
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; N
cell division protein FtsZ
13_1_40cm_4_scaffold_17686_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5188..6102
DNA (915bp) protein (305aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00036AEEEC
lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
13_1_40cm_4_scaffold_17686_7
unknown

Not on your lists

6211..6393
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_40cm_4_scaffold_17686_8
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6343..6819)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X7Q3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KHQ93488.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein
13_1_40cm_4_scaffold_17686_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6857..7726
DNA (870bp) protein (290aa)
Peptidase M23B n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y646_NITMU
peptidase M23B Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
peptidase M23B
13_1_40cm_4_scaffold_17686_10
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7798..8112)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI66320.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
Uncharacterized protein id=2511409 bin=GWF1_Xanthomonadales_69_6 species=Collinsella aerofaciens genus=Collinsella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
13_1_40cm_4_scaffold_17686_11
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8762..10111
DNA (1350bp) protein (450aa)
preprotein translocase subunit SecA n=1 Tax=Methyloversatilis universalis RepID=UPI00035C0C81
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" sou
azi, div; preprotein translocase subunit SecA
13_1_40cm_4_scaffold_17686_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10152..10427
DNA (276bp) protein (92aa)
Protein translocase subunit SecA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AJ36_9PROT
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellacea
13_1_40cm_4_scaffold_17686_13
Neisseria meningitidis, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10502..11062)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Neisseria meningitidis alpha275 RepID=C6SHD0_NEIME
Uncharacterized protein {ECO:0000313|EMBL:CBA04890.1}; TaxID=295996 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria meningitidis alph
hypothetical protein
13_1_40cm_4_scaffold_17686_14
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11182..11676
DNA (495bp) protein (165aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.1 2.3.1.35)
N-acetylglutamate synthase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00035FF7AD
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;"
13_1_40cm_4_scaffold_17686_15
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11676..12584
DNA (909bp) protein (303aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK29_AZOSU
putative ATPase (AAA+ superfamily)
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:AEV25462.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae
13_1_40cm_4_scaffold_17686_16
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12581..13525
DNA (945bp) protein (315aa)
8-oxo-dGTPase {ECO:0000313|EMBL:ABE50497.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABE50497.1};; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methyloba
8-oxo-dGTPase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GZ40_METFK
hypothetical protein
13_1_40cm_4_scaffold_17686_17
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13735..14046)
DNA (312bp) protein (104aa)
Cell division protein ZapD n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP06_SIDLE
hypothetical protein Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
hypothetical protein
13_1_40cm_4_scaffold_17686_18
unknown

Not on your lists

14114..14491
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_4_scaffold_17686_19
Solanum lycopersicum, Solanum, Solanales, asterids, Streptophyta, Viridiplantae

Not on your lists

comp(14516..15136)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Solanum lycopersicum RepID=K4ARP3_SOLLC
Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc00g134830.1.1}; TaxID=4081 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyled
dephospho-CoA kinase
13_1_40cm_4_scaffold_17686_20
RifOxyB12_full_Sideroxydans_59_6_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15139..16002)
DNA (864bp) protein (288aa)
Prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RifOxyB12_full_Sideroxydans_59_6_curated
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI0003818123
pilD; type IV fimbrial biogenesis protein, prepilin cysteine protease
Displaying 20 items

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