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13_1_40cm_4_scaffold_1791

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_1791_1
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..269
DNA (267bp) protein (89aa)
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B7D8_9PROT
ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Tax=CG_Beta_01
ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
13_1_40cm_4_scaffold_1791_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

305..1090
DNA (786bp) protein (262aa)
thiol:disulfide interchange protein DsbC; K03981 thiol:disulfide interchange protein DsbC [EC:5.3.4.1] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Thiol:disulfide interchange protein DsbC n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SGG6_THIDA
thiol:disulfide interchange protein DsbC
13_1_40cm_4_scaffold_1791_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1120..2205
DNA (1086bp) protein (362aa)
excisionase family DNA binding domain-containing protein id=12557729 bin=CNBR_ACIDO species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA-binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
excisionase family DNA binding domain-containing protein
13_1_40cm_4_scaffold_1791_4
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2215..2646
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKP4_DESB2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK86253.1}; Flags: Precursor;; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" sourc
13_1_40cm_4_scaffold_1791_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2748..3863
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D129_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20041.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
13_1_40cm_4_scaffold_1791_6
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3910..4614
DNA (705bp) protein (235aa)
Short chain dehydrogenase n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AJS6_BURGB
short chain dehydrogenase family protein
Short chain dehydrogenase {ECO:0000313|EMBL:ACR32156.1}; TaxID=626418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glu
13_1_40cm_4_scaffold_1791_7

Not on your lists

comp(4711..5082)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 2303 RepID=B8R912_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACF98168.1}; TaxID=548900 species="Bacteria; environmental samples.;" source="uncultured bacterium 2303.;"
13_1_40cm_4_scaffold_1791_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5079..5480)
DNA (402bp) protein (134aa)
acetyltransferase; K03790 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Uncharacterized protein n=1 Tax=Acinetobacter beijerinckii CIP 110307 RepID=N9FDT6_9GAMM
GCN5-related N-acetyltransferase
13_1_40cm_4_scaffold_1791_9
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5676..6431
DNA (756bp) protein (252aa)
ferredoxin-NADP reductase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036469FD
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACL74136.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivib
13_1_40cm_4_scaffold_1791_10
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6505..6870)
DNA (366bp) protein (122aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1101195 species="Bacteria; Proteobacteria; Betapr
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI000378EB81
peptidylprolyl isomerase, FKBP-type
13_1_40cm_4_scaffold_1791_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7211..8920
DNA (1710bp) protein (570aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLB0_THIDA
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
13_1_40cm_4_scaffold_1791_12
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9007..9846)
DNA (840bp) protein (280aa)
Conserved hypothetical membrane protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2I0_AZOSB
TonB, C-terminal Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
tolA; hypothetical protein
13_1_40cm_4_scaffold_1791_13
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9846..10253)
DNA (408bp) protein (136aa)
Protein TolR n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AF68_9PROT
Biopolymer transporter ExbD {ECO:0000313|EMBL:GAO35802.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella
protein TolR
13_1_40cm_4_scaffold_1791_14
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10256..10921)
DNA (666bp) protein (222aa)
protein TolQ; K03562 biopolymer transport protein TolQ Tax=GWA2_Gallionellales_59_43_curated
MotA/TolQ/ExbB proton channel family protein; K03562 biopolymer transport protein TolQ id=12496613 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
tolQ; protein TolQ
13_1_40cm_4_scaffold_1791_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10943..11353)
DNA (411bp) protein (137aa)
4-hydroxybenzoyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=GWE1_Thiobacillus_62_9_curated
4-hydroxybenzoyl-CoA thioesterase id=1336263 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
4-hydroxybenzoyl-CoA thioesterase
13_1_40cm_4_scaffold_1791_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11353..12033)
DNA (681bp) protein (227aa)
Holliday junction ATP-dependent DNA helicase ruvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Holliday junction DNA helicase RuvB n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI0003803372
Holliday junction DNA helicase RuvB
13_1_40cm_4_scaffold_1791_17
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12330..13025)
DNA (696bp) protein (232aa)
ruvA; Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X547_9BURK
ATP-dependent DNA helicase RuvA
13_1_40cm_4_scaffold_1791_18
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13099..13494
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A310C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA48884.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source
13_1_40cm_4_scaffold_1791_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13464..14192)
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein Nmul_A2722 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Y2722_NITMU
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
hypothetical protein
13_1_40cm_4_scaffold_1791_20
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14433..15071)
DNA (639bp) protein (213aa)
Peptidase S16, lon domain protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJH4_AZOSU
peptidase S16, lon domain-containing protein
Peptidase S16, lon domain protein {ECO:0000313|EMBL:AEV25399.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae
13_1_40cm_4_scaffold_1791_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15084..15794)
DNA (711bp) protein (237aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosom
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCY2_NITMU
aromatic acid decarboxylase
13_1_40cm_4_scaffold_1791_22
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15858..16694)
DNA (837bp) protein (279aa)
hypothetical protein; K06958 UPF0042 nucleotide-binding protein id=12497757 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Nucleotide-binding protein SQ11_05270 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source=
hypothetical protein
13_1_40cm_4_scaffold_1791_23
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16817..17776)
DNA (960bp) protein (320aa)
HPr kinase/phosphorylase (EC:2.7.11.-)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036AFB40
13_1_40cm_4_scaffold_1791_24
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17773..18234)
DNA (462bp) protein (154aa)
ptsN; phosphotransferase system mannitol/fructose-specific IIA domain-containing protein (EC:2.7.1.69); K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_02_FULL_Betap
PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH19_AZOSU
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
13_1_40cm_4_scaffold_1791_25
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18288..18641)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000369BF5A
ribosomal subunit Interface protein; K05808 putative sigma-54 modulation protein Tax=RBG_16_Betaproteobacteria_58_11_curated
sigma 54 modulation protein/ribosomal protein S30EA
13_1_40cm_4_scaffold_1791_26
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18688..20121)
DNA (1434bp) protein (478aa)
RNA polymerase sigma-54 factor n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QH21_AZOSU
RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
RNA polymerase sigma-54 factor
13_1_40cm_4_scaffold_1791_27
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20241..20963)
DNA (723bp) protein (241aa)
ATP-binding ABC transporter protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YRM2_9RHOO
ATP-binding ABC transporter protein {ECO:0000313|EMBL:ENO85007.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linalo
lptB_yhbG; lipopolysaccharide export system ATP-binding protein
13_1_40cm_4_scaffold_1791_28
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20986..21645)
DNA (660bp) protein (220aa)
OstA-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCX6_NITMU
OstA-like protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
OstA-like protein
13_1_40cm_4_scaffold_1791_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21642..22262)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO49541.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp.
Putative uncharacterized protein id=1915013 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
13_1_40cm_4_scaffold_1791_30
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22259..22831)
DNA (573bp) protein (191aa)
Phosphatase kdsC n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SLC5_THIDA
phosphatase kdsC
HAD family hydrolase {ECO:0000313|EMBL:KJZ12060.1}; TaxID=579478 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S2151.;"
Displaying items 1-30 of 32 in total

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