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13_1_40cm_4_scaffold_21542

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_21542_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2697)
DNA (2697bp) protein (899aa)
metH; B12-dependent methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
metH; B12-dependent methionine synthase (EC:2.1.1.13); K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] id=12495805 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
methionine synthase (EC:2.1.1.13)
13_1_40cm_4_scaffold_21542_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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2875..3315
DNA (441bp) protein (147aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Putative 4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VG57_9RHOB
thioesterase superfamily protein
13_1_40cm_4_scaffold_21542_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3317..3880)
DNA (564bp) protein (188aa)
pcaG_1; protocatechuate 3,4-dioxygenase subunit alpha (EC:1.13.11.3); K00448 protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
pcaB3; 3-carboxy-cis,cis-muconate cycloisomerase (EC:5.5.1.2)
Protocatechuate 3,4-dioxygenase alpha subunit n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GTG1_CUPNN
13_1_40cm_4_scaffold_21542_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3877..4590)
DNA (714bp) protein (238aa)
pcaH; protocatechuate 3,4-dioxygenase subunit beta (EC:1.13.11.3); K00449 protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
Protocatechuate 3,4-dioxygenase beta chain (EC:1.13.11.3)
protocatechuate 3,4-dioxygenase subunit beta n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI000381DD87
13_1_40cm_4_scaffold_21542_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4587..5210)
DNA (624bp) protein (208aa)
Maleylacetoacetate isomerase n=2 Tax=Thauera RepID=C4ZLK9_THASP
nagL; maleylpyruvate isomerase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
maleylacetoacetate isomerase
13_1_40cm_4_scaffold_21542_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5207..5704)
DNA (498bp) protein (166aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Pseudomonas sp. GM55 RepID=J3B1I6_9PSED
putative fumarylpyruvate hydrolase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
5-carboxymethyl-2-hydroxymuconate isomerase
13_1_40cm_4_scaffold_21542_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5902..6336
DNA (435bp) protein (145aa)
Bacterial regulatory protein, MarR n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P0I4_AROAE
transcriptional regulator, MarR family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
transcriptional regulator, MarR family
13_1_40cm_4_scaffold_21542_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6382..7854)
DNA (1473bp) protein (491aa)
Putative ammonium transporter transmembrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SC45_METPP
ammonium transporter transmembrane protein; K03320 ammonium transporter, Amt family Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ammonium transporter transmembrane protein
13_1_40cm_4_scaffold_21542_9
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7865..8203)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=mine drainage metagenome RepID=T1CGQ4_9ZZZZ
nitrogen regulatory protein PII; K04752 nitrogen regulatory protein P-II 2 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
nitrogen regulatory protein PII
13_1_40cm_4_scaffold_21542_10
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8248..8514)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RMR4_ACCPU
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
hypothetical protein
Displaying 10 items

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