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13_1_40cm_4_scaffold_2968

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2968_1
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

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1..567
DNA (567bp) protein (189aa)
pyrH; uridylate kinase (EC:2.7.4.-) Tax=CG_Beta_01
pyrH; uridylate kinase (EC:2.7.4.-)
uridylate kinase n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000366957B
13_1_40cm_4_scaffold_2968_2
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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594..1151
DNA (558bp) protein (186aa)
ribosome recycling factor n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003615EC6
ribosome-recycling factor
ribosome recycling factor; K02838 ribosome recycling factor Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
13_1_40cm_4_scaffold_2968_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1290..1973
DNA (684bp) protein (228aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomo
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFG1_9PROT
13_1_40cm_4_scaffold_2968_4
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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1986..2831
DNA (846bp) protein (282aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales;
Phosphatidate cytidylyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AH59_9PROT
phosphatidate cytidylyltransferase
13_1_40cm_4_scaffold_2968_5
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2828..4036
DNA (1209bp) protein (403aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z6W6_9RHOO
13_1_40cm_4_scaffold_2968_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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4033..5385
DNA (1353bp) protein (451aa)
Peptidase M50, putative membrane-associated zinc metallopeptidase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H146_METFK
peptidase M50 membrane-associated zinc metallopeptidase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
peptidase M50, membrane-associated zinc metallopeptidase
13_1_40cm_4_scaffold_2968_7
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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5363..7717
DNA (2355bp) protein (785aa)
Outer membrane protein assembly factor BamA n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ACC0_9PROT
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430}; Flags: Precursor;; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae
surface antigen (D15)
13_1_40cm_4_scaffold_2968_8
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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7731..8270
DNA (540bp) protein (180aa)
Outer membrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B4A0_9PROT
Membrane protein {ECO:0000313|EMBL:GAO35735.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
ompH; outer membrane protein
13_1_40cm_4_scaffold_2968_9
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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8582..8932
DNA (351bp) protein (117aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallion
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPD3_AZOSU
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
13_1_40cm_4_scaffold_2968_10
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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8896..9591
DNA (696bp) protein (232aa)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-); K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=CG_Hydro_01
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003659EB3
13_1_40cm_4_scaffold_2968_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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9594..10043
DNA (450bp) protein (150aa)
beta-hydroxyacyl-(acyl carrier protein) dehydratase FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
3-hydroxyacyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=FABZ_THIDA
13_1_40cm_4_scaffold_2968_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10051..10827
DNA (777bp) protein (259aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] id=12496944 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=GWE1_Thiobacillus_62_9_curated
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Displaying 12 items

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