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13_1_40cm_4_scaffold_5061

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5061_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..3024)
DNA (3024bp) protein (1008aa)
gdh; NAD-glutamate dehydrogenase; K15371 glutamate dehydrogenase [EC:1.4.1.2] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
gdh2; NAD-specific glutamate dehydrogenase (EC:1.4.1.2)
NAD-glutamate dehydrogenase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003778B68
13_1_40cm_4_scaffold_5061_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3224..3460)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TE04_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH88377.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_4_scaffold_5061_trna_1
unknown

Not on your lists

comp(3586..3669)
DNA (84bp)
transferRNA
13_1_40cm_4_scaffold_5061_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3773..4828
DNA (1056bp) protein (352aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B682_9PROT
queA; s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
13_1_40cm_4_scaffold_5061_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5334..5966
DNA (633bp) protein (211aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=TGT_METFK
13_1_40cm_4_scaffold_5061_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6031..6357
DNA (327bp) protein (109aa)
Putative Preprotein translocase subunit YajC n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5R7F8_9RHOO
yajC; protein translocase auxillary subunit; K03210 preprotein translocase subunit YajC Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
transmembrane protein
13_1_40cm_4_scaffold_5061_6
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6382..8247
DNA (1866bp) protein (622aa)
Protein translocase subunit SecD n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B677_9PROT
protein-export membrane protein, SecD/SecF family
Tax=BJP_IG2103_Dechloromonas_63_51
13_1_40cm_4_scaffold_5061_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8378..9322
DNA (945bp) protein (315aa)
Protein-export membrane protein SecF n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AIF4_9PROT
protein-export membrane protein, SecD/SecF family; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
secF; preprotein translocase subunit SecF
13_1_40cm_4_scaffold_5061_8
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9454..10053
DNA (600bp) protein (200aa)
Putative membrane protein n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D5X4_LARHH
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACO74005.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkong
13_1_40cm_4_scaffold_5061_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10072..11550)
DNA (1479bp) protein (493aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RBG_16_Betaproteobacteria_64_18_curated
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQ27_SIDLE
13_1_40cm_4_scaffold_5061_10
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11656..12267
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI00035FE793
Glutathione S-transferase {ECO:0000313|EMBL:KJV27382.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii
glutathione S-transferase-like protein
13_1_40cm_4_scaffold_5061_11
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12389..14029)
DNA (1641bp) protein (547aa)
Transporter n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6ZY00_PSEST
major facilitator transporter Tax=CG_Alphaprot_01
transporter
13_1_40cm_4_scaffold_5061_12
unknown

Not on your lists

14194..14388
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_4_scaffold_5061_13
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14301..14690)
DNA (390bp) protein (130aa)
Response regulator receiver protein n=1 Tax=Thauera phenylacetica B4P RepID=N6Z417_9RHOO
response regulator receiver protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
response regulator receiver domain-containing protein
13_1_40cm_4_scaffold_5061_14
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14687..15886)
DNA (1200bp) protein (400aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124K1_POLSJ
periplasmic sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
sensor signal transduction histidine kinase
13_1_40cm_4_scaffold_5061_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15825..17375)
DNA (1551bp) protein (517aa)
Histidine kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBY7_ANADF
periplasmic sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
histidine kinase
13_1_40cm_4_scaffold_5061_16
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17413..17610)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000379DCE5
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
hypothetical protein
13_1_40cm_4_scaffold_5061_17
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17633..17920)
DNA (288bp) protein (96aa)
Serine/threonine protein kinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZG4_9RHIZ
Serine/threonine protein kinase {ECO:0000313|EMBL:KIF82933.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspi
protein kinase
13_1_40cm_4_scaffold_5061_18
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17913..18404)
DNA (492bp) protein (164aa)
Serine/threonine protein kinase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J7I4_ANAD2
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACL67164.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobac
Displaying 19 items

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