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13_1_40cm_4_scaffold_5172

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_5172_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..279)
DNA (279bp) protein (93aa)
Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=1 Tax=Herbaspirillum sp. YR522 RepID=J2VED9_9BURK
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KGF79452.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massili
oxidoreductase FAD-binding domain protein
13_1_40cm_4_scaffold_5172_2
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(276..725)
DNA (450bp) protein (150aa)
phenylacetic acid degradation protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000372769D
Phenylacetic acid degradation protein PaaJ {ECO:0000313|EMBL:KEC77586.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group;
paaD; phenylacetic acid degradation protein PaaD
13_1_40cm_4_scaffold_5172_3
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(849..1619)
DNA (771bp) protein (257aa)
Phenylacetate-CoA oxygenase, PaaI subunit n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UT9_CUPPJ
phenylacetate-CoA oxygenase subunit PaaI
Phenylacetate-CoA oxygenase, PaaI subunit {ECO:0000313|EMBL:AAZ63095.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="C
13_1_40cm_4_scaffold_5172_4
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1732..2019)
DNA (288bp) protein (96aa)
Phenylacetic acid degradation B n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UU0_CUPPJ
paaB; phenylacetate-CoA oxygenase subunit PaaB
Phenylacetic acid degradation B {ECO:0000313|EMBL:AAZ63094.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
13_1_40cm_4_scaffold_5172_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2042..3034)
DNA (993bp) protein (331aa)
Phenylacetate-CoA oxygenase, PaaG subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YLN9_9RHIZ
Phenylacetate-CoA oxygenase, PaaG subunit {ECO:0000313|EMBL:EIM24881.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Mi
paaA; phenylacetic acid degradation protein PaaA
13_1_40cm_4_scaffold_5172_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3096..4070
DNA (975bp) protein (325aa)
Putative regulator of anaerobic phenylacetate metabolism n=1 Tax=Azoarcus sp. KH32C RepID=H0PU88_9RHOO
padR; putative regulator of anaerobic phenylacetate metabolism Tax=CG_Rhodocyc_01
padR; putative regulator of anaerobic phenylacetate metabolism
13_1_40cm_4_scaffold_5172_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4142..5416)
DNA (1275bp) protein (425aa)
fahA; fumarylacetoacetase (EC:3.7.1.2)
Fumarylacetoacetase n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4JI42_9BURK
Fumarylacetoacetase {ECO:0000313|EMBL:KJB97441.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolat
13_1_40cm_4_scaffold_5172_8
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5416..6765)
DNA (1350bp) protein (450aa)
Homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:000025
Homogentisate 1,2-dioxygenase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AAA9_COLFT
13_1_40cm_4_scaffold_5172_9
unknown

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comp(6781..7005)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_4_scaffold_5172_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7097..7420)
DNA (324bp) protein (108aa)
enoyl-CoA hydratase (EC:4.2.1.17) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QG36_RALPI
hypothetical protein
13_1_40cm_4_scaffold_5172_11
unknown

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7557..7973
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_40cm_4_scaffold_5172_12
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7865..8680)
DNA (816bp) protein (272aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQ49_9RHIZ
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJN02451.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobial
multiple sugar transport system permease protein
13_1_40cm_4_scaffold_5172_13
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8677..9561)
DNA (885bp) protein (295aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P342_AZOS1
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:BAI75212.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirilla
13_1_40cm_4_scaffold_5172_14
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9563..9910)
DNA (348bp) protein (116aa)
Extracellular solute-binding protein family 1 n=1 Tax=Marinomonas sp. (strain MWYL1) RepID=A6VRP5_MARMS
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABR69124.1}; Flags: Precursor;; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" s
Displaying 14 items

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