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13_1_40cm_4_scaffold_4551_9

Organism: 13_1_40CM_4_Betaproteobacteria_64_4

partial RP 28 / 55 MC: 1 BSCG 27 / 51 MC: 1 ASCG 4 / 38
Location: comp(7078..7527)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGS4_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 149.0
  • Bit_score: 237
  • Evalue 9.30e-60
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 149.0
  • Bit_score: 246
  • Evalue 2.10e-62
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 149.0
  • Bit_score: 237
  • Evalue 2.60e-60

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGGGTGACCGCGAAGTTGATCAGCAGCTCGTGGAGCGTGCGCAGCGGGGCGACAAGCGTGCCTTCGAGCTGTTGGTGTTGAAGTACCAGCGCAAACTGGCACGGCTGTTGTCGCGATTGGTGCGCGACGCCGGGGAAGTCGAGGATGTGACGCAGGAGGCGTTTATCAAGGCCTACCGTGCGCTGCCGAGCTTCCGCGGGGAAAGTGCGTTTTACACCTGGCTGTACCGTATCGCGATCAATACCGCCAAGAATTATCTGGTCGCGATAGGGCGGCGGGCGCCGACTTCGACCGGTTTCGACCACGAGGAGGCGGAAAACTTCGAGGACGCCGAGCAGCTGCGTGACTCGAATACGCCGGAGAACGAGCTGCTGGGCAGAGAAATCGCGACCACGGTCAACAAGGCGATGGACGCGCTGCCCGACGATCTGCGTACGGCGATCACGTGA
PROTEIN sequence
Length: 150
MGDREVDQQLVERAQRGDKRAFELLVLKYQRKLARLLSRLVRDAGEVEDVTQEAFIKAYRALPSFRGESAFYTWLYRIAINTAKNYLVAIGRRAPTSTGFDHEEAENFEDAEQLRDSNTPENELLGREIATTVNKAMDALPDDLRTAIT*