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13_1_40cm_4_scaffold_4551

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_4551_1
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..178)
DNA (177bp) protein (59aa)
transmembrane protein Tax=CG_Hydro_01
13_1_40cm_4_scaffold_4551_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191..1006)
DNA (816bp) protein (272aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadac
Signal peptidase I n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIU1_9PROT
signal peptidase I
13_1_40cm_4_scaffold_4551_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1146..2960)
DNA (1815bp) protein (605aa)
Elongation factor 4 {ECO:0000255|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000255|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000255|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000255|HAMAP
Elongation factor 4 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=LEPA_NITMU
GTP-binding protein LepA
13_1_40cm_4_scaffold_4551_4
R_RIF_OD1_04_46_36, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

3252..3632
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PSI6_9RHOO
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_04_46_36_curated
hypothetical protein
13_1_40cm_4_scaffold_4551_5
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3698..3940)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13VM5_BURXL
hypothetical protein
glutaredoxin-like domain containing protein Tax=RBG_16_Betaproteobacteria_64_18_curated
13_1_40cm_4_scaffold_4551_6
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3952..5385)
DNA (1434bp) protein (478aa)
protease Do (EC:3.4.21.107); K01362 [EC:3.4.21.-] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
Periplasmic serine protease, Do/DeqQ family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QMI1_AZOSU
periplasmic serine protease, Do/DeqQ family
13_1_40cm_4_scaffold_4551_7
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5432..6433)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EH89_9BACT
algN; sigma factor algU regulatory protein mucB; K03598 sigma-E factor negative regulatory protein RseB Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
sigma E regulatory protein, MucB/RseB
13_1_40cm_4_scaffold_4551_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6420..6977)
DNA (558bp) protein (186aa)
Sigma factor RpoE negative regulatory protein RseA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIT8_9PROT
anti sigma-E protein, RseA; K03597 sigma-E factor negative regulatory protein RseA Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein
13_1_40cm_4_scaffold_4551_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7078..7527)
DNA (450bp) protein (150aa)
RNA polymerase sigma factor n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AGS4_9PROT
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
RNA polymerase sigma factor RpoE
13_1_40cm_4_scaffold_4551_10
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7711..8745)
DNA (1035bp) protein (345aa)
L-asparagine amidohydrolase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X745_9BURK
asparagine amidohydrolase
Asparagine amidohydrolase {ECO:0000313|EMBL:AJE98596.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
13_1_40cm_4_scaffold_4551_11
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8793..10637)
DNA (1845bp) protein (615aa)
Propionate--CoA ligase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AC72_9PROT
prpE; Propionate--CoA ligase
Propionate--CoA ligase {ECO:0000313|EMBL:BAN35328.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denit
13_1_40cm_4_scaffold_4551_12
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10755..11759)
DNA (1005bp) protein (335aa)
Zinc-containing alcohol dehydrogenase superfamily n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GS3_DECAR
zinc-containing alcohol dehydrogenase superfamily protein
Zinc-containing alcohol dehydrogenase superfamily protein {ECO:0000313|EMBL:BAO30228.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritale
13_1_40cm_4_scaffold_4551_13
Burkholderia sp. RPE64, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11774..12910)
DNA (1137bp) protein (379aa)
AFG1-family ATPase n=1 Tax=Burkholderia sp. RPE64 RepID=R4WYR9_9BURK
AFG1-family ATPase
AFG1-family ATPase {ECO:0000313|EMBL:BAN23417.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.
13_1_40cm_4_scaffold_4551_14
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12942..13094)
DNA (153bp) protein (51aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
Dihydrolipoyl dehydrogenase n=2 Tax=Delftia acidovorans RepID=S2X8F5_DELAC
13_1_40cm_4_scaffold_4551_15
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13322..13657
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FFJ4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIJ71746.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
13_1_40cm_4_scaffold_4551_16
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14333..14845)
DNA (513bp) protein (171aa)
sucB; dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
dihydrolipoamide succinyltransferase n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000365CA0D
Displaying 16 items

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