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13_1_40cm_4_scaffold_561

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_561_1

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1..444
DNA (444bp) protein (148aa)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEF7_RHOM4
Marine sediment metagenome DNA, contig: S01H1_L01385 {ECO:0000313|EMBL:GAF79265.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phosphoribosylformylglycinamidine synthase I
13_1_40cm_4_scaffold_561_2
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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456..2633
DNA (2178bp) protein (726aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHA8_9FIRM
13_1_40cm_4_scaffold_561_3
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

2636..4096
DNA (1461bp) protein (487aa)
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RBG_13_Actinobacteria_55_18_curated
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
hypothetical protein n=1 Tax=Fervidibacteria bacterium SCGC AAA471-D06 RepID=UPI000368CE6C
13_1_40cm_4_scaffold_561_4
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4102..5055
DNA (954bp) protein (318aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CFX2_MYXFH
13_1_40cm_4_scaffold_561_5
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5238..5624
DNA (387bp) protein (129aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P4Z9_CYAGP
phosphoribosylformylglycinamidine synthase, clade II
13_1_40cm_4_scaffold_561_6
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5599..7125
DNA (1527bp) protein (509aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSW4_9FIRM
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellac
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
13_1_40cm_4_scaffold_561_7
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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7138..7884
DNA (747bp) protein (249aa)
tryptophan 2,3-dioxygenase (EC:1.13.11.11)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAM
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036D571C
13_1_40cm_4_scaffold_561_8
unknown

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7920..8060
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_4_scaffold_561_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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8057..9115
DNA (1059bp) protein (353aa)
aminotransferase V n=1 Tax=Patulibacter americanus RepID=UPI0003B74F07
class V aminotransferase Tax=RBG_16_Actinobacteria_68_12_curated
cysteine desulfurase
13_1_40cm_4_scaffold_561_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9112..10566)
DNA (1455bp) protein (485aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZT8_CONWI
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB49914.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
13_1_40cm_4_scaffold_561_11
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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10684..11163
DNA (480bp) protein (160aa)
Transcriptional regulator, MarR family n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LGX6_FRASN
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABW12747.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
13_1_40cm_4_scaffold_561_12
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11168..12331)
DNA (1164bp) protein (388aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADG89815.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ADG89815.1};; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;"
Acetyl-CoA acetyltransferase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y879_THEBD
13_1_40cm_4_scaffold_561_13
unknown

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comp(12359..12640)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_4_scaffold_561_14
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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comp(12686..13822)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000364B18E
Na+ ABC efflux pump permease; K09696 sodium transport system permease protein Tax=RBG_13_Chloroflexi_66_10_curated
ABC transporter
13_1_40cm_4_scaffold_561_15
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(13819..14544)
DNA (726bp) protein (242aa)
ABC-type Na+ transport system, ATPase component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMW7_SINAD
ABC transporter related protein {ECO:0000313|EMBL:KKW01876.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
Na+ ABC transporter ATPase
13_1_40cm_4_scaffold_561_16
unknown

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comp(14544..14942)
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_4_scaffold_561_17
RLO_PLX_64_10, Bacteria

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15021..15947
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Uncharacterized protein n=1 Tax=Thellungiella salsuginea RepID=V4LVG5_THESL
aspartate carbamoyltransferase
13_1_40cm_4_scaffold_561_18
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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15944..16492
DNA (549bp) protein (183aa)
Bifunctional protein PyrR n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67Q02_SYMTH
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
phosphoribosyltransferase
13_1_40cm_4_scaffold_561_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

16500..20861
DNA (4362bp) protein (1454aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphae
Carbamoyl-phosphate synthase large chain n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2A6_SPHTD
carbamoyl-phosphate synthase large subunit
13_1_40cm_4_scaffold_561_20
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20890..21648
DNA (759bp) protein (253aa)
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QMI6_DESB2
dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:ADK86229.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria;
13_1_40cm_4_scaffold_561_21
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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21657..22559
DNA (903bp) protein (301aa)
Dihydroorotate dehydrogenase n=1 Tax=Dehalococcoides mccartyi BTF08 RepID=M1RF78_9CHLR
dihydroorotate dehydrogenase 1B
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
13_1_40cm_4_scaffold_561_22
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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22570..23256
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036DCF10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB30230.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 /
13_1_40cm_4_scaffold_561_23
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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23286..24059
DNA (774bp) protein (258aa)
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
atm:ANT_09920 putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein id=1244901 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_561_24
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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24031..25362
DNA (1332bp) protein (444aa)
hypothetical protein Tax=RBG_13_Chloroflexi_50_21_curated
Hypothetical membrane protein id=4317575 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
13_1_40cm_4_scaffold_561_25
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(25290..26555)
DNA (1266bp) protein (422aa)
Major facilitator superfamily MFS_1 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JRF3_DESFR
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67931.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
multidrug-efflux transporter
13_1_40cm_4_scaffold_561_26
unknown

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26599..27060
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_4_scaffold_561_27
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(27050..27250)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037FCA43
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ABL81840.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / J
13_1_40cm_4_scaffold_561_28
unknown

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comp(27430..27888)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_4_scaffold_561_29
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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27950..28708
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXZ7_9BACT
Short-chain alcohol dehydrogenase of unknown specificity
Uncharacterized protein {ECO:0000313|EMBL:CCW35188.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas cal
13_1_40cm_4_scaffold_561_30
unknown

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comp(29367..29759)
DNA (393bp) protein (131aa)

This feature has no annotations

Displaying items 1-30 of 47 in total

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