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13_1_40cm_4_scaffold_2767

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2767_1
unknown

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2..94
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_4_scaffold_2767_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(128..397)
DNA (270bp) protein (90aa)
Uncharacterized protein id=4870480 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_4_scaffold_2767_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1093..1383)
DNA (291bp) protein (97aa)
copper resistance D domain-containing protein; K07245 putative copper resistance protein D id=14626780 bin=bin7_NC10_sister species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
copper resistance D domain-containing protein; K07245 putative copper resistance protein D Tax=CSP1_6_Rokubacteria
copper resistance protein
13_1_40cm_4_scaffold_2767_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1628..2773)
DNA (1146bp) protein (382aa)
Uncharacterized protein id=4870515 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
membrane protein Tax=GWA2_Rokubacteria_70_23_curated
membrane protein
13_1_40cm_4_scaffold_2767_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2815..3873)
DNA (1059bp) protein (353aa)
Oxidoreductase domain protein Tax=GWA2_Rokubacteria_70_23_curated
Putative Oxidoreductase domain protein id=4870514 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Oxidoreductase domain protein
13_1_40cm_4_scaffold_2767_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3875..4174)
DNA (300bp) protein (100aa)
aminotransferase (EC:2.6.1.-) Tax=GWA2_Rokubacteria_70_23_curated
aminotransferase (EC:2.6.1.-)
Aminotransferase id=4396514 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2767_7
unknown

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4374..5204
DNA (831bp) protein (277aa)

This feature has no annotations

13_1_40cm_4_scaffold_2767_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5168..6004)
DNA (837bp) protein (279aa)
Uncharacterized protein id=4870512 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_4_scaffold_2767_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6024..6656)
DNA (633bp) protein (211aa)
Putative Nucleotidyl transferase id=4870511 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Nucleotidyl transferase Tax=GWA2_Rokubacteria_70_23_curated
Nucleotidyl transferase
13_1_40cm_4_scaffold_2767_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6731..7426)
DNA (696bp) protein (232aa)
Putative HAD-superfamily hydrolase, subfamily IA, variant 3 id=4870510 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=GWA2_Rokubacteria_70_23_curated
HAD-superfamily hydrolase, subfamily IA, variant 3
13_1_40cm_4_scaffold_2767_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7558..8724)
DNA (1167bp) protein (389aa)
Integral membrane transferase id=4268406 bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
integral membrane transferase Tax=GWA2_Rokubacteria_73_35_curated
membrane protein
13_1_40cm_4_scaffold_2767_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8721..9461)
DNA (741bp) protein (247aa)
Putative Sugar nucleotidyltransferase id=4268407 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative sugar nucleotidyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative sugar nucleotidyltransferase
13_1_40cm_4_scaffold_2767_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9458..10618)
DNA (1161bp) protein (387aa)
phosphonopyruvate decarboxylase (EC:4.1.1.82) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phosphonopyruvate decarboxylase (EC:4.1.1.82)
Phosphoenolpyruvate mutase id=4268408 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2767_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10618..12285)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YCR2_SORCE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_4_scaffold_2767_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12282..12914)
DNA (633bp) protein (211aa)
Uncharacterized protein id=2224572 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_4_scaffold_2767_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12938..13378)
DNA (441bp) protein (147aa)
Mce-related protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Mce-related protein id=14625628 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Mce-related protein
13_1_40cm_4_scaffold_2767_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13378..14133)
DNA (756bp) protein (252aa)
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative ABC transporter (ATP-binding protein) id=3917310 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
13_1_40cm_4_scaffold_2767_18
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(14319..15113)
DNA (795bp) protein (265aa)
toluene tolerance protein Ttg2B; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
yrbE; toluene ABC transporter subunit membrane protein id=14625626 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
toluene tolerance protein Ttg2B
13_1_40cm_4_scaffold_2767_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15106..17028)
DNA (1923bp) protein (641aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase id=3818237 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_2767_20
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

17051..17800
DNA (750bp) protein (250aa)
hypothetical protein; K08977 putative membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Membrane protein-like protein id=2224622 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_2767_21
GWC2_Methylomirabilis_70_24, GWC2_Methylomirabilis_70_24, GWC2_Methylomirabilis_70_24, GWC2_Methylomirabilis_70_24, Methylomirabilis, Bacteria

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comp(17871..18104)
DNA (234bp) protein (78aa)
id=3917305 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=3917305 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_4_scaffold_2767_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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18332..18790
DNA (459bp) protein (153aa)
radical SAM protein Tax=GWA2_Rokubacteria_73_35_curated
Fe-S protein, radical SAM family id=3818235 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
radical SAM protein
13_1_40cm_4_scaffold_2767_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18807..18941
DNA (135bp) protein (45aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Radical SAM domain protein id=2224623 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 23 items

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