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13_1_40cm_4_scaffold_51

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_51_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2..625
DNA (624bp) protein (208aa)
Enoyl-CoA hydratase/isomerase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Enoyl-CoA hydratase/isomerase id=3362958 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Sulfolobus taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
13_1_40cm_4_scaffold_51_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

630..1634
DNA (1005bp) protein (335aa)
luciferase-like protein id=14626177 bin=bin7_NC10_sister species=Sciscionella marina genus=Sciscionella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
luciferase-like protein Tax=CSP1_6_Rokubacteria
luciferase-like protein
13_1_40cm_4_scaffold_51_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1704..2474
DNA (771bp) protein (257aa)
glyoxalase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glyoxalase family protein id=14626176 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
glyoxalase family protein
13_1_40cm_4_scaffold_51_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2489..3466
DNA (978bp) protein (326aa)
TRAP-T family transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
TRAP-T family transporter id=4585779 bin=GWF2_Methylomirabilis_70_14 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP-T family transporter
13_1_40cm_4_scaffold_51_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3454..4005
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_ANIW93N21 RepID=B3T341_9ZZZZ
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AIB15998.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum bra
13_1_40cm_4_scaffold_51_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3998..5863
DNA (1866bp) protein (622aa)
TRAP transporter, 4TM/12TM fusion protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
TRAP transporter, 4TM/12TM fusion protein id=4585778 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TRAP transporter, 4TM/12TM fusion protein
13_1_40cm_4_scaffold_51_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6135..6410)
DNA (276bp) protein (92aa)
conserved hypothetical protein; putative PIN domain Tax=GWC2_Rokubacteria_70_16_curated
PilT protein-like id=3068381 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
conserved hypothetical protein; putative PIN domain
13_1_40cm_4_scaffold_51_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6500..6709)
DNA (210bp) protein (70aa)
putative Transcriptional regulator AbrB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Transcriptional regulator, AbrB family id=3068382 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thiomonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AbrB family transcriptional regulator
13_1_40cm_4_scaffold_51_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6864..7673
DNA (810bp) protein (270aa)
Polysaccharide deacetylase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA38_SPHTD
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
polysaccharide deacetylase
13_1_40cm_4_scaffold_51_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7949..9160
DNA (1212bp) protein (404aa)
Beta subunit of phenylphosphate carboxylase n=3 Tax=Mycobacterium RepID=H8IMD5_MYCIA
beta subunit of phenylphosphate carboxylase Tax=GWA2_Rokubacteria_73_35_curated
beta subunit of phenylphosphate carboxylase
13_1_40cm_4_scaffold_51_11
unknown

Not on your lists

9181..9432
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_4_scaffold_51_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9432..9707
DNA (276bp) protein (92aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4799901 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_51_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9745..10926)
DNA (1182bp) protein (394aa)
major facilitator superfamily MFS 1 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Fosmidomycin resistance protein id=4947488 bin=GWA2_Methylomirabilis_73_35 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major Facilitator Superfamily protein
13_1_40cm_4_scaffold_51_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11048..11674
DNA (627bp) protein (209aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17) Tax=GWA2_Rokubacteria_73_35_curated
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase id=4947487 bin=GWA2_Methylomirabilis_73_35 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_51_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

11705..11857
DNA (153bp) protein (51aa)
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
13_1_40cm_4_scaffold_51_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12192..12680
DNA (489bp) protein (163aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
(2Fe-2S)-binding domain protein id=3729521 bin=GWF2_Methylomirabilis_70_14 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
13_1_40cm_4_scaffold_51_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12691..13320
DNA (630bp) protein (210aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
4-hydroxybenzoyl-CoA reductase subunit alpha id=3983840 bin=GWC2_Methylomirabilis_70_24 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
oxidoreductase molybdopterin binding protein
13_1_40cm_4_scaffold_51_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13383..15209
DNA (1827bp) protein (609aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4-hydroxybenzoyl-CoA reductase subunit alpha id=4915860 bin=GWC2_Methylomirabilis_70_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_4_scaffold_51_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15438..16259
DNA (822bp) protein (274aa)
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein id=14627887 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
13_1_40cm_4_scaffold_51_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16268..16435
DNA (168bp) protein (56aa)
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein id=14627887 bin=bin7_NC10_sister species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_51_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16432..16980
DNA (549bp) protein (183aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cupin 2 domain-containing protein id=4915863 bin=GWC2_Methylomirabilis_70_16 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
MerR family transcriptional regulator
13_1_40cm_4_scaffold_51_22
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

16990..18663
DNA (1674bp) protein (558aa)
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] id=14627885 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] Tax=CSP1_6_Rokubacteria
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17)
13_1_40cm_4_scaffold_51_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18663..20084
DNA (1422bp) protein (474aa)
boxB; benzoyl-CoA oxygenase component B; K15512 benzoyl-CoA 2,3-dioxygenase component B [EC:1.14.12.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Benzoyl-CoA oxygenase component B (BoxB) n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JJH8_BURP8
boxB; benzoyl-CoA oxygenase subunit B
13_1_40cm_4_scaffold_51_24
unknown

Not on your lists

20658..20891
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_4_scaffold_51_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

21035..22585
DNA (1551bp) protein (517aa)
Putative benzoate-CoA ligase BzlA (Fragment) n=1 Tax=Clostridia bacterium enrichment culture clone BF RepID=D8WWP9_9FIRM
benzoate-CoA ligase family Tax=GWA2_Rokubacteria_73_35_curated
benzoate-CoA ligase family
13_1_40cm_4_scaffold_51_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

22616..23890
DNA (1275bp) protein (425aa)
paaK; phenylacetate-CoA ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phenylacetate-CoA ligase id=4124058 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
paaK; phenylacetate-CoA ligase
13_1_40cm_4_scaffold_51_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24038..24589
DNA (552bp) protein (184aa)
RNA polymerase sigma factor, sigma-70 family protein id=3960152 bin=GWA2_Methylomirabilis_73_35 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Rokubacteria_73_35_curated
RNA polymerase sigma factor SigK
13_1_40cm_4_scaffold_51_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24586..25365
DNA (780bp) protein (260aa)
Putative uncharacterized protein id=3960150 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transmembrane anti-sigma factor Tax=GWA2_Rokubacteria_73_35_curated
Conserved putative membrane protein
13_1_40cm_4_scaffold_51_29
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25375..25935)
DNA (561bp) protein (187aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX hydrolase id=4492889 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase
13_1_40cm_4_scaffold_51_30
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(25932..26234)
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uncharacterized protein id=4950952 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative 52,8 kDa protein in TAR-I ttuC' 3'region
Displaying items 1-30 of 47 in total

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