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13_1_40cm_4_scaffold_6347

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6347_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..1004
DNA (1002bp) protein (334aa)
glnA; glutamine synthetase, type I, N-terminal (Glutamate--ammonia ligase I) (GSI) (EC:6.3.1.2)
glnA; glutamine synthetase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glutamine synthetase id=4348817 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_6347_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1216..1944
DNA (729bp) protein (243aa)
Response regulator receiver Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Response regulator receiver id=4759489 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Response regulator receiver
13_1_40cm_4_scaffold_6347_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2041..2658
DNA (618bp) protein (206aa)
Putative phosphate transport regulator id=2317445 bin=GWA2_Methylomirabilis_73_35 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate transport regulator; K07220 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
phosphate transport regulator
13_1_40cm_4_scaffold_6347_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2658..3650
DNA (993bp) protein (331aa)
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phosphate/sulphate permease id=2317444 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pit; low-affinity phosphate transporter
13_1_40cm_4_scaffold_6347_5
R_NC10_66_22, NC10, Bacteria

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3701..4114
DNA (414bp) protein (138aa)
acT domain-containing protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ACT domain-containing protein id=4139003 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acT domain-containing protein
13_1_40cm_4_scaffold_6347_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4186..5082
DNA (897bp) protein (299aa)
DMT(Drug/metabolite transporter) superfamily permease id=4759440 bin=GWC2_Methylomirabilis_70_16 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
13_1_40cm_4_scaffold_6347_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5085..6173
DNA (1089bp) protein (363aa)
hypothetical protein; K06966 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Possible lysine decarboxylase family id=4476360 bin=GWF2_Methylomirabilis_70_14 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_4_scaffold_6347_8
R_NC10_66_22, NC10, Bacteria

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comp(6464..7375)
DNA (912bp) protein (304aa)
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Binding-protein-dependent transport systems inner membrane component id=4279220 bin=GWF2_Methylomirabilis_70_14 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
13_1_40cm_4_scaffold_6347_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(7381..8253)
DNA (873bp) protein (291aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component id=4279221 bin=GWF2_Methylomirabilis_70_14 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
oligopeptide ABC transporter permease
13_1_40cm_4_scaffold_6347_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8296..8784)
DNA (489bp) protein (163aa)
Extracellular solute-binding protein family 5 id=4279222 bin=GWF2_Methylomirabilis_70_14 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter substrate binding protein (dipeptide); K02035 peptide/nickel transport system substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
family 5 extracellular solute-binding protein
Displaying 10 items

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