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13_1_40cm_4_scaffold_6775

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6775_1
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..160
DNA (159bp) protein (53aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RBG_16_Deltaproteobacteria_54_18_curated
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase id=2244673 bin=GWB2_Proteobacteria_55_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
13_1_40cm_4_scaffold_6775_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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169..669
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G7_GEMAT
hypothetical protein; K08999 hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
protein of unknown function DUF151
13_1_40cm_4_scaffold_6775_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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794..1639
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G8_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_4_scaffold_6775_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2027..2788
DNA (762bp) protein (254aa)
ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8G9_GEMAT
ABC transporter substrate-binding protein; K02016 iron complex transport system substrate-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC transporter substrate-binding protein
13_1_40cm_4_scaffold_6775_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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2785..3726
DNA (942bp) protein (314aa)
Putative vitamin B12 transport protein BtuC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M8_GEMAT
transmembrane ABC transporter protein,permease; K02015 iron complex transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
btuD; putative vitamin B12 transport protein BtuC
13_1_40cm_4_scaffold_6775_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3711..4469
DNA (759bp) protein (253aa)
btuC; putative vitamin B12 transport protein BtuD; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative vitamin B12 transport protein BtuD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5M7_GEMAT
btuC; putative vitamin B12 transport protein BtuD
13_1_40cm_4_scaffold_6775_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4466..6358
DNA (1893bp) protein (631aa)
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHA1_9BACT
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG90671.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_6775_8
R_WOR_2_68_15, WOR-2, Bacteria

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6386..7069
DNA (684bp) protein (228aa)
hypothetical protein; K06927 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
ATP-binding protein; K06927 id=14424885 bin=bin1_lowGC species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
PP-loop superfamily ATP-utilizing enzyme
13_1_40cm_4_scaffold_6775_9
unknown

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7066..8112
DNA (1047bp) protein (349aa)

This feature has no annotations

13_1_40cm_4_scaffold_6775_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8140..8934
DNA (795bp) protein (265aa)
DNA repair protein RecO n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H2_GEMAT
DNA repair protein recO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;"
13_1_40cm_4_scaffold_6775_11
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8976..9743
DNA (768bp) protein (256aa)
selenocysteine-specific translation elongation factor (EC:2.7.7.4)
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:ACX51820.1}; EC=2.7.7.4 {ECO:0000313|EMBL:ACX51820.1};; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobact
Selenocysteine-specific translation elongation factor n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RC43_AMMDK
13_1_40cm_4_scaffold_6775_12
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9772..10785
DNA (1014bp) protein (338aa)
selenocysteine-specific protein translation elongation factor; K03833 selenocysteine-specific elongation factor Tax=CG_Syntroph_01
Selenocysteine-specific protein translation Elongation Factor id=3879000 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
selenocysteine-specific translation elongation factor SelB
13_1_40cm_4_scaffold_6775_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10871..11314
DNA (444bp) protein (148aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
ial:IALB_0995 hemagluttinin repeat-containing protein id=718416 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
13_1_40cm_4_scaffold_6775_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11450..14074
DNA (2625bp) protein (875aa)
Chaperone ClpB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8H4_GEMAT
ATP-dependent chaperone ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_6775_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14154..14582
DNA (429bp) protein (143aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacter
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI000382DBC1
CMP/dCMP deaminase zinc-binding protein
13_1_40cm_4_scaffold_6775_16
unknown

Not on your lists

14582..15370
DNA (789bp) protein (263aa)

This feature has no annotations

13_1_40cm_4_scaffold_6775_17
unknown

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comp(15376..16059)
DNA (684bp) protein (228aa)

This feature has no annotations

13_1_40cm_4_scaffold_6775_18
unknown

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comp(16069..16506)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_4_scaffold_6775_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16503..17171)
DNA (669bp) protein (223aa)
Putative RNA polymerase sigma factor n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QK23_9RHIZ
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88832.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_6775_20
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17508..17657)
DNA (150bp) protein (50aa)
Tax=RBG_16_Actinobacteria_67_15_curated
13_1_40cm_4_scaffold_6775_21
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

17814..18380
DNA (567bp) protein (189aa)
tnaA; tryptophanase; K01667 tryptophanase [EC:4.1.99.1] Tax=GWC2_RIF_CHLX_73_18_curated
Tryptophanase id=2501312 bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tryptophanase
Displaying 21 items

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