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13_1_40cm_4_scaffold_7404

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_7404_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3..143
DNA (141bp) protein (47aa)
formyl-CoA transferase; K07749 formyl-CoA transferase [EC:2.8.3.16]
CAIB/BAIF family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4426882 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_4_scaffold_7404_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

145..1023
DNA (879bp) protein (293aa)
id=3202777 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14627973 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_7404_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1028..1219
DNA (192bp) protein (64aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_4_scaffold_7404_4
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

1224..2345
DNA (1122bp) protein (374aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
2-nitropropane dioxygenase NPD n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D0Y5_PAESJ
2-nitropropane dioxygenase NPD
13_1_40cm_4_scaffold_7404_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2342..3361
DNA (1020bp) protein (340aa)
luciferase family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Luciferase family protein id=3646803 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
luciferase family protein
13_1_40cm_4_scaffold_7404_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3372..4400
DNA (1029bp) protein (343aa)
alcohol dehydrogenase Tax=CSP1_6_Rokubacteria
alcohol dehydrogenase id=14627609 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
alcohol dehydrogenase
13_1_40cm_4_scaffold_7404_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4414..4644)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8Y7_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06222.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (
13_1_40cm_4_scaffold_7404_8
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(4944..5471)
DNA (528bp) protein (176aa)
hypothetical protein
alias=16ft_combo_ws3_scaffold_11273_12 Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
alias=16ft_combo_ws3_scaffold_11273_12 id=14625152 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_7404_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5881..6465)
DNA (585bp) protein (195aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes id=4379942 bin=GWA2_Methylomirabilis_73_35 species=uncultured gamma proteobacterium HF4000_19M20 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NUDIX hydrolase Tax=GWA2_Rokubacteria_73_35_curated
NUDIX hydrolase
13_1_40cm_4_scaffold_7404_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6713..7174
DNA (462bp) protein (154aa)
transcription regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Endoribonuclease L-PSP id=4379943 bin=GWA2_Methylomirabilis_73_35 species=Flavobacteria bacterium MS024-2A genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
endoribonuclease L-PSP
13_1_40cm_4_scaffold_7404_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7304..8443
DNA (1140bp) protein (380aa)
Multi-sensor hybrid histidine kinase id=4701609 bin=GWC2_Methylomirabilis_70_24 species=Allochromatium vinosum genus=Allochromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
multi-sensor hybrid histidine kinase Tax=GWA2_Rokubacteria_70_23_curated
PAS/PAC sensor hybrid histidine kinase
13_1_40cm_4_scaffold_7404_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8440..8595
DNA (156bp) protein (52aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4379973 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_4_scaffold_7404_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8615..9535
DNA (921bp) protein (307aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4) Tax=GWA2_Rokubacteria_73_35_curated
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein id=4734635 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 13 items

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