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13_1_40cm_4_scaffold_134

Search features with annotation key words

Displaying items 1-30 of 80 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_134_1
unknown

Not on your lists

3..404
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_4_scaffold_134_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(460..1749)
DNA (1290bp) protein (430aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6K1_9CHLR
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH80612.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter
major facilitator transporter
13_1_40cm_4_scaffold_134_3
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1862..2341)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Rhodococcus sp. JVH1 RepID=J1ZHK8_9NOCA
esterase Tax=RBG_16_RIF_CHLX_72_14_curated
esterase
13_1_40cm_4_scaffold_134_4
Mycobacterium indicus pranii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2393..3016)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Smaragdicoccus niigatensis RepID=UPI00038298DF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS15314.1}; TaxID=1232724 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source=
13_1_40cm_4_scaffold_134_5
unknown

Not on your lists

comp(3112..3552)
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_4_scaffold_134_6
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3631..4287
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7P3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:ETK37242.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
13_1_40cm_4_scaffold_134_7
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

4289..5038
DNA (750bp) protein (250aa)
LmbE family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TU34_9CHLR
LmbE family protein Tax=RBG_13_Chloroflexi_68_17_curated
LmbE family protein
13_1_40cm_4_scaffold_134_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5282..5695
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA87_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40146.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_4_scaffold_134_9
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5790..6311
DNA (522bp) protein (174aa)
Conserved uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FPI3_STIAD
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO73178.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" s
13_1_40cm_4_scaffold_134_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6319..6717)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI00036D1C1C
Uncharacterized protein {ECO:0000313|EMBL:KJL35163.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
13_1_40cm_4_scaffold_134_11
Acinetobacter guillouiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6810..7322
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Acinetobacter guillouiae RepID=N8S559_ACIGI
Uncharacterized protein {ECO:0000313|EMBL:ENU58380.1}; TaxID=1217655 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter guil
hypothetical protein
13_1_40cm_4_scaffold_134_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7319..7555
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00036486F4
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EKY29427.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Br
Cro/Cl family transcriptional regulator
13_1_40cm_4_scaffold_134_trna_1
unknown

Not on your lists

7572..7644
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_134_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8003..8479
DNA (477bp) protein (159aa)
Heat shock protein Hsp20 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI33_RHOMR
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEN73791.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
hspA_[H]; heat shock protein, Hsp20 family
13_1_40cm_4_scaffold_134_14
unknown

Not on your lists

comp(8936..9220)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_134_15
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9343..9900)
DNA (558bp) protein (186aa)
phoB; PhoB; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
winged helix family two component transcriptional regulator
13_1_40cm_4_scaffold_134_16
unknown

Not on your lists

10145..10408
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_4_scaffold_134_17
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

10462..10722
DNA (261bp) protein (87aa)
10 kDa chaperonin n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5V3_DESAS
groS; chaperonin, 10 kDa; K04078 chaperonin GroES Tax=RBG_16_RIF_CHLX_70_13_curated
chaperonin Cpn10
13_1_40cm_4_scaffold_134_18
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10744..12363
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSU9_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=401526 speci
groEL; molecular chaperone GroEL
13_1_40cm_4_scaffold_134_19
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12439..12765)
DNA (327bp) protein (109aa)
Putative ester cyclase {ECO:0000313|EMBL:AHH17585.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
hypothetical protein id=14628475 bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_40cm_4_scaffold_134_20
unknown

Not on your lists

12958..13266
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_4_scaffold_134_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

14165..14566
DNA (402bp) protein (134aa)
Ribonuclease VapC n=2 Tax=Mycobacterium RepID=D5PE24_9MYCO
Conserved protein of unknown function with PIN domain, possible toxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Conserved protein of unknown function with PIN domain, possible toxin
13_1_40cm_4_scaffold_134_22
unknown

Not on your lists

comp(14603..14821)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_4_scaffold_134_23
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15075..15797
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5ADFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL47655.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strai
13_1_40cm_4_scaffold_134_24
unknown

Not on your lists

comp(16791..17021)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_40cm_4_scaffold_134_25
unknown

Not on your lists

comp(17347..17793)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_4_scaffold_134_26
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(17783..18199)
DNA (417bp) protein (139aa)
glyoxalase n=1 Tax=Amycolatopsis methanolica RepID=UPI00036BA6B8
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_RIF_CHLX_69_14_curated
lyase
13_1_40cm_4_scaffold_134_27
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18196..18645)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037B8512
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ETT24929.1}; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous A
AraC family transcriptional regulator
13_1_40cm_4_scaffold_134_28
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(18642..19319)
DNA (678bp) protein (226aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTA3_9CHLR
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EFH83654.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
xylose isomerase domain-containing protein
13_1_40cm_4_scaffold_134_29
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19845..20102)
DNA (258bp) protein (86aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
Displaying items 1-30 of 80 in total

View Taxonomy