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13_1_40cm_4_scaffold_11090

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_11090_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..1762
DNA (1761bp) protein (587aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MFC2_CORCM
thrS; threonyl-tRNA synthetase
13_1_40cm_4_scaffold_11090_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2131..2658
DNA (528bp) protein (176aa)
Translation initiation factor IF-3 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=IF3_ANADF
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000255|HAMAP-Rule:MF_00080}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_4_scaffold_11090_3
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2723..2932
DNA (210bp) protein (70aa)
50S ribosomal protein L35 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL35_SYNAS
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geo
13_1_40cm_4_scaffold_11090_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3019..3363
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QIW1_9DELT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystob
rplT; 50S ribosomal protein L20
13_1_40cm_4_scaffold_11090_5
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3438..3653
DNA (216bp) protein (72aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5H1_9CLOT
phenylalanyl-tRNA synthetase subunit alpha
13_1_40cm_4_scaffold_11090_6
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3728..4459
DNA (732bp) protein (244aa)
pheS; phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q091T0_STIAD
13_1_40cm_4_scaffold_11090_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4456..6849
DNA (2394bp) protein (798aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBJ1_ANADF
pheT; phenylalanyl-tRNA synthetase subunit beta
13_1_40cm_4_scaffold_11090_8
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6846..7427)
DNA (582bp) protein (194aa)
2-hydroxychromene-2-carboxylate isomerase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09B82_STIAD
2-hydroxychromene-2-carboxylate isomerase family protein
2-hydroxychromene-2-carboxylate isomerase family protein {ECO:0000313|EMBL:EAU68955.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacter
13_1_40cm_4_scaffold_11090_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7449..8120)
DNA (672bp) protein (224aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine sulfoxide reductase A n=1 Tax=Fischerella muscicola RepID=UPI0002FF80D7
methionine-S-sulfoxide reductase
13_1_40cm_4_scaffold_11090_trna_1
unknown

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8544..8617
DNA (74bp)
transferRNA
13_1_40cm_4_scaffold_11090_10
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9328..9525)
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:AFE05834.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
hypothetical protein
13_1_40cm_4_scaffold_11090_11
unknown

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comp(9578..9853)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_11090_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9956..10147
DNA (192bp) protein (64aa)
YcfA superfamily protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H3Z8_CAUCN
YcfA superfamily protein
Uncharacterized protein {ECO:0000313|EMBL:AAK25146.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresce
13_1_40cm_4_scaffold_11090_13
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10150..10728
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0E232_RALPI
Uncharacterized protein {ECO:0000313|EMBL:ENZ75597.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
transcriptional regulator
13_1_40cm_4_scaffold_11090_14
unknown

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comp(10570..11232)
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_40cm_4_scaffold_11090_15
unknown

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comp(11482..11559)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 16 items

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