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13_1_40cm_4_scaffold_2364

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2364_1
unknown

Not on your lists

1..522
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_4_scaffold_2364_2
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(578..1813)
DNA (1236bp) protein (412aa)
Lipoprotein, putative n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGS4_COLFT
lipoprotein
Lipoprotein, putative {ECO:0000313|EMBL:AEK61687.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivoran
13_1_40cm_4_scaffold_2364_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1828..2280)
DNA (453bp) protein (151aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
hypothetical protein
Uncharacterized protein id=3077315 bin=GWC2_Syntrophobacterales_56_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_4_scaffold_2364_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(2386..2844)
DNA (459bp) protein (153aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; S
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2H3_CONWI
alkylhydroperoxidase
13_1_40cm_4_scaffold_2364_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2919..3803
DNA (885bp) protein (295aa)
RNA polymerase sigma 70 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRX4_SORCE
RNA polymerase sigma 70
RNA polymerase sigma 70 {ECO:0000313|EMBL:AGP35927.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_4_scaffold_2364_6
unknown

Not on your lists

3902..6952
DNA (3051bp) protein (1017aa)

This feature has no annotations

13_1_40cm_4_scaffold_2364_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7105..7773
DNA (669bp) protein (223aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_1_40cm_4_scaffold_2364_8
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7780..8196)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QHX8_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KIF35132.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
13_1_40cm_4_scaffold_2364_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8241..9671)
DNA (1431bp) protein (477aa)
YVTN family beta-propeller repeat protein n=1 Tax=Rhizobium sp. CF142 RepID=J2AQW0_9RHIZ
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:KFC74452.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" sourc
40-residue YVTN family beta-propeller repeat-containing protein
13_1_40cm_4_scaffold_2364_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9673..10083)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289BEFA
Variovorax paradoxus strain MEDvA23 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36837.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
hypothetical protein
13_1_40cm_4_scaffold_2364_11
unknown

Not on your lists

10361..11017
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_40cm_4_scaffold_2364_12
unknown

Not on your lists

comp(11037..11402)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_4_scaffold_2364_13
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11772..12617
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8G2_METB6
Uncharacterized protein {ECO:0000313|EMBL:AKF04126.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
13_1_40cm_4_scaffold_2364_14
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12642..13187
DNA (546bp) protein (182aa)
Putative secreted protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3A8_9DELT
YceI family protein
Putative secreted protein {ECO:0000313|EMBL:EPX56747.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="
13_1_40cm_4_scaffold_2364_15
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13184..14347
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P0W0_9DELT
Uncharacterized protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
hypothetical protein
13_1_40cm_4_scaffold_2364_16
unknown

Not on your lists

comp(14504..14782)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_4_scaffold_2364_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14845..15402
DNA (558bp) protein (186aa)
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG88971.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14626591 bin=bin7_NC10_sister species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_4_scaffold_2364_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15517..16278
DNA (762bp) protein (254aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88972.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2364_19
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16304..17206
DNA (903bp) protein (301aa)
Transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB49_9DELT
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:KIG19306.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa sali
LysR family transcriptional regulator
13_1_40cm_4_scaffold_2364_20
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17239..18114
DNA (876bp) protein (292aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUI3_9RHIZ
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AIQ59254.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
13_1_40cm_4_scaffold_2364_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18195..18659
DNA (465bp) protein (155aa)
Membrane protein-like protein; K08983 putative membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Membrane protein-like protein id=4761904 bin=GWA2_Elusimicrobia_69_24 species=Burkholderia gladioli genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
membrane protein-like protein
13_1_40cm_4_scaffold_2364_22
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18681..19058)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CDD1_9PLAN
DoxX family protein Tax=RBG_13_Actinobacteria_63_9_curated
DoxX family protein
13_1_40cm_4_scaffold_2364_23
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19181..19585
DNA (405bp) protein (135aa)
hit1; histidine triad protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_16_Anaeromyxobacter_69_14_curated
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation id=14011 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
histidine triad (HIT) protein
13_1_40cm_4_scaffold_2364_24
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19598..21166
DNA (1569bp) protein (523aa)
GMC oxidoreductase family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MN35_CORCM
choD1; GMC oxidoreductase family protein
GMC oxidoreductase family protein {ECO:0000313|EMBL:AFE08346.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" s
13_1_40cm_4_scaffold_2364_25
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21163..21714
DNA (552bp) protein (184aa)
Acetyltransferase, GNAT family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QMW2_9DELT
Acetyltransferase {ECO:0000313|EMBL:KFA92395.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobac
acetyltransferase
13_1_40cm_4_scaffold_2364_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22020..22481
DNA (462bp) protein (154aa)
(2Fe-2S)-binding protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035EEDE5
Isoquinoline 1-oxidoreductase alpha subunit {ECO:0000313|EMBL:EYF01182.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces
(2Fe-2S)-binding protein
13_1_40cm_4_scaffold_2364_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22478..24619
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8V5_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40690.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_4_scaffold_2364_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24616..25254
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GMW2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN93494.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
13_1_40cm_4_scaffold_2364_29
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25196..26170)
DNA (975bp) protein (325aa)
Transcriptional regulator, LysR family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P498_9DELT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EPX57047.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacte
LysR family transcriptional regulator
13_1_40cm_4_scaffold_2364_30
unknown

Not on your lists

26263..26637
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

View Taxonomy
NameRatio
Proteobacteria
58.06%
unknown
19.35%
Gemmatimonadetes
6.45%
Actinobacteria
6.45%
Rokubacteria
3.23%
Firmicutes
3.23%
Cyanobacteria
3.23%
Proteobacteria: 0.5806451612903226unknown: 0.1935483870967742Actinobacteria: 0.06451612903225806Gemmatimonadetes: 0.06451612903225806Cyanobacteria: 0.03225806451612903Firmicutes: 0.03225806451612903Rokubacteria: 0.03225806451612903Proteobacteriaunknown