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13_1_40cm_4_scaffold_6442

Search features with annotation key words

Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_6442_1
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(239..472)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YFG7_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR01558.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhiz
hypothetical protein
13_1_40cm_4_scaffold_6442_2
unknown

Not on your lists

541..825
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_3
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

822..1235
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2D4_ANATU
Uncharacterized protein {ECO:0000313|EMBL:AKF04292.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
13_1_40cm_4_scaffold_6442_4
unknown

Not on your lists

comp(1428..1898)
DNA (471bp) protein (157aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_5
unknown

Not on your lists

comp(2030..2329)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_6
unknown

Not on your lists

comp(2338..2613)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_7
unknown

Not on your lists

comp(2677..2916)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2949..3947)
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEK0_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC83007.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_6442_9
unknown

Not on your lists

4643..4876
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_10
unknown

Not on your lists

comp(4797..5564)
DNA (768bp) protein (256aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_11
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6502..7086)
DNA (585bp) protein (195aa)
rnhA; ribonuclease h (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TYV8_9DELT
Ribonuclease H {ECO:0000313|EMBL:ERK90759.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp.
13_1_40cm_4_scaffold_6442_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7087..7818)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INW5_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC80497.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_4_scaffold_6442_trna_1
unknown

Not on your lists

comp(7952..8024)
DNA (73bp)
transferRNA
13_1_40cm_4_scaffold_6442_13
unknown

Not on your lists

7977..8606
DNA (630bp) protein (210aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_14
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8667..10817)
DNA (2151bp) protein (717aa)
RNA polymerase sigma factor RpoD n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QMZ3_9DELT
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cyst
rpoD; RNA polymerase sigma factor rpod
13_1_40cm_4_scaffold_6442_15
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10905..12623)
DNA (1719bp) protein (573aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1278073 species="Bacteria; Proteobacte
DNA primase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UGJ8_MYXSD
DNA primase
13_1_40cm_4_scaffold_6442_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12713..13165)
DNA (453bp) protein (151aa)
GatB/Yqey domain protein n=2 Tax=Myxococcus xanthus RepID=Q1D1W8_MYXXD
GatB/Yqey domain-containing protein
GatB/Yqey domain protein {ECO:0000313|EMBL:ABS24972.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_4_scaffold_6442_17
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13241..13438)
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=4 Tax=Anaeromyxobacter RepID=RS21_ANAD2
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
13_1_40cm_4_scaffold_6442_18
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13602..14873
DNA (1272bp) protein (424aa)
signal transduction histidine kinase NtrB (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Ana
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJD5_ANADE
13_1_40cm_4_scaffold_6442_19
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14894..15229)
DNA (336bp) protein (112aa)
Integration host factor subunit beta n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMF1_CORCM
ihfB; integration host factor subunit beta
Integration host factor subunit beta {ECO:0000313|EMBL:AFE09120.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;
13_1_40cm_4_scaffold_6442_20
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15327..16025)
DNA (699bp) protein (233aa)
Putative ribonuclease BN n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8A6_ANADF
putative ribonuclease BN
Putative ribonuclease BN {ECO:0000313|EMBL:ABS24952.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
13_1_40cm_4_scaffold_6442_21
unknown

Not on your lists

16263..16409
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_22
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16651..18981)
DNA (2331bp) protein (777aa)
Ribonuclease, Rne/Rng family n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UDH9_ANASK
ribonuclease, Rne/Rng family
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ACG71970.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter
13_1_40cm_4_scaffold_6442_23
unknown

Not on your lists

comp(19317..19697)
DNA (381bp) protein (127aa)

This feature has no annotations

13_1_40cm_4_scaffold_6442_24
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19802..20530)
DNA (729bp) protein (243aa)
abortive infection protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B78D42
Uncharacterized protein {ECO:0000313|EMBL:KFN44769.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
CAAX amino terminal protease family
13_1_40cm_4_scaffold_6442_25
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20527..21975)
DNA (1449bp) protein (483aa)
Radical SAM domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JD58_ANAD2
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACL64086.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;
13_1_40cm_4_scaffold_6442_26
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21963..23054)
DNA (1092bp) protein (364aa)
Radical SAM domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JD58_ANAD2
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACL64086.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;
13_1_40cm_4_scaffold_6442_27
Candidatus Korarchaeum cryptofilum, Candidatus Korarchaeum, Korarchaeota, Archaea

Not on your lists

comp(23130..23402)
DNA (273bp) protein (91aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=374847 species="Archaea; Korarchaeota; Candidatus Korarchaeum.;" source="Korarchaeum cryptofilum (st
hypothetical protein n=2 Tax=unclassified candidate division pSL4 RepID=UPI0003634384
acylphosphatase
13_1_40cm_4_scaffold_6442_28
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23399..25411)
DNA (2013bp) protein (671aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {EC
DNA ligase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PIX2_9DELT
NAD-dependent DNA ligase
13_1_40cm_4_scaffold_6442_29
unknown

Not on your lists

26679..26894
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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